RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 CXorf51AA0A1B0GTR3 108 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 CCDC78A2IDD5 438 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 GAPDHSO14556 408 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 NBNO60934 754 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 UBTFL6P0CB48 400 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 HMGA1P17096 107 aaKnown RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 ATP6V0D1P61421 351 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 STX5Q13190 355 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 POLD3Q15054 466 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 TAF1AQ15573 450 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 SDHAF4Q5VUM1 108 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 IL23RQ5VWK5 629 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 CXorf57Q6NSI4 855 aaKnown RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 ARPINQ7Z6K5 226 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 CHCHD4Q8N4Q1 142 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 FUBP1Q96AE4 644 aaKnown RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 CDKN2AIPNLQ96HQ2 116 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 DNAJC1Q96KC8 554 aaKnown RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 TBATAQ96M53 351 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 SLC25A23Q9BV35 468 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 TLR8Q9NR97 1041 aaKnown RBP12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 NOD1Q9Y239 953 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 DTNAQ9Y4J8 743 aa12.58□□□□□ -0.4
PPP4R3A-206ENST00000554943 SMIM31A0A1B0GVY4 71 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 PPP6CO00743 305 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 KIF3CO14782 793 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 UBDO15205 165 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 NDST3O95803 873 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 HSPA13P48723 471 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 SREBF2Q12772 1141 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 MED21Q13503 144 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 KIAA0040Q15053 153 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 BLOC1S3Q6QNY0 202 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 ZNF783Q6ZMS7 281 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 AGR3Q8TD06 166 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 ALG14Q96F25 216 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 SCYL1Q96KG9 808 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 SPAG4Q9NPE6 437 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 ANKRD28O15084 1053 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 CES1P23141 567 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 ALDH3B2P48448 385 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 HK3P52790 923 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 CDH4P55283 916 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 RCAN2Q14206 197 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 RAP1GAP2Q684P5 730 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 VWCEQ96DN2 955 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 NUSAP1Q9BXS6 441 aaKnown RBP12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 YIPF3Q9GZM5 350 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 CCM2LQ9NUG4 571 aaPredicted RBP12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 ABI2Q9NYB9 513 aaPredicted RBP12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 MARCH2Q9P0N8 246 aa12.57□□□□□ -0.4
PPP4R3A-206ENST00000554943 PDLIM1O00151 329 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 ACOX3O15254 700 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 NRP2O60462 931 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 RAMP2O60895 175 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 PRSS23O95084 383 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 CAPN3P20807 821 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 MRPS22P82650 360 aaKnown RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 TAF10Q12962 218 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 FASTKQ14296 549 aaKnown RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 GK3PQ14409 553 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 TRIP10Q15642 601 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 INTS11Q5TA45 600 aaKnown RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 GLB1LQ6UWU2 654 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 TFAP2DQ7Z6R9 452 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 OR4L1Q8NH43 312 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 CCDC124Q96CT7 223 aaKnown RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 ANKRD60Q9BZ19 345 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 PCTPQ9UKL6 214 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 MRPL42Q9Y6G3 142 aaKnown RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 A0A0D9SEW6 157 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 NME4O00746 187 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 ENPP3O14638 875 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 SGSHP51688 502 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 PKNOX1P55347 436 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 PABPC1LQ4VXU2 614 aaKnown RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 RTP2Q5QGT7 225 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 SPRED1Q7Z699 444 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 OR13C4Q8NGS5 318 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 GABPB2Q8TAK5 448 aaPredicted RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 EID2BQ96D98 161 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 TRMT2BQ96GJ1 504 aaKnown RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 TSNARE1Q96NA8 513 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 HHIPQ96QV1 700 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 SEMA3CQ99985 751 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 HOPXQ9BPY8 73 aaPredicted RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 ALG9Q9H6U8 611 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 CCSER2Q9H7U1 834 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 AGPAT4Q9NRZ5 378 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 MUC22E2RYF6 1773 aaPredicted RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 E2F3O00716 465 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 BAG2O95816 211 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 KLKB1P03952 638 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 HOXB9P17482 250 aaPredicted RBP12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 HDCP19113 662 aa12.56□□□□□ -0.4
PPP4R3A-206ENST00000554943 CLCN7P51798 805 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms