RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 CD19P15391 556 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 SLC5A2P31639 672 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 RAP1GAPP47736 663 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 MARCKSL1P49006 195 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 DGKEP52429 567 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 SEC24CP53992 1094 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 EPHB4P54760 987 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 ALDH18A1P54886 795 aaKnown RBP4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 CDH8P55286 799 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 RWDD2BP57060 319 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 AP2B1P63010 937 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 FOXL1Q12952 345 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 C2CD6Q53TS8 623 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 UBXN11Q5T124 520 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 FAM102AQ5T9C2 384 aaPredicted RBP4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 MAP3K21Q5TCX8 1036 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 SEL1L2Q5TEA6 688 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 AGAP9Q5VTM2 703 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 EMBQ6PCB8 327 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 LAYNQ6UX15 382 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 ERICH1Q86X53 443 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 IFT20Q8IY31 132 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 LGI4Q8N135 537 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 WDTC1Q8N5D0 677 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 C1orf131Q8NDD1 294 aaKnown RBP4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 KLHDC9Q8NEP7 349 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 BEST2Q8NFU1 509 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 CCDC26Q8TAB7 109 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 DNAJB14Q8TBM8 379 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 AENQ8WTP8 325 aaKnown RBP4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 HERVK_113Q902F9 699 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 AP1M1Q9BXS5 423 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 TRIM7Q9C029 511 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 VIPAS39Q9H9C1 493 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 WASH6PQ9NQA3 447 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 GDF3Q9NR23 364 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 UBQLN1Q9UMX0 589 aaKnown RBP4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 HES2Q9Y543 173 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 TRPV2Q9Y5S1 764 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 NLRC5Q86WI3 1866 aa4.86□□□□□ -1.63
PPP4R3A-204ENST00000554574 SMIM28A0A1B0GU29 152 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 TMEM191CA6NGB0 347 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 O00370 1275 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 PIRO00625 290 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 RAD51CO43502 376 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 PSTPIP1O43586 416 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 TSPAN15O95858 294 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 ASGR1P07306 291 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 SPATA31D3P0C874 917 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 SRGAP2BP0DMP2 458 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 VDRP11473 427 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 ATF7P17544 494 aaPredicted RBP4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 CYP3A5P20815 502 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 HOXD10P28358 340 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 LRPAP1P30533 357 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 MSX2P35548 267 aaPredicted RBP4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 PNPLA4P41247 253 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 TUBP50607 506 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 NDST1P52848 882 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 BCAT1P54687 386 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 POLE2P56282 527 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 NHLH2Q02577 135 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 SCAPQ12770 1279 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 GPS1Q13098 491 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 CUL1Q13616 776 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 PIGHQ14442 188 aaPredicted RBP4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 CASP8Q14790 479 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 CYP1B1Q16678 543 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 PTPN20Q4JDL3 420 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 C9orf57Q5W0N0 161 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 ABLIM2Q6H8Q1 611 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 TWF2Q6IBS0 349 aaKnown RBP4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 DNAJC24Q6P3W2 148 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 TMEM108Q6UXF1 575 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 SPATA31D4Q6ZUB0 917 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 FAM228AQ86W67 206 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 UNC93AQ86WB7 457 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 RASGRP3Q8IV61 690 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 KLHL7Q8IXQ5 586 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 NIPA2Q8N8Q9 360 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 OR56A1Q8NGH5 318 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 FEZF2Q8TBJ5 459 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 CSGALNACT1Q8TDX6 532 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 PPP2R3CQ969Q6 453 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 ZNF560Q96MR9 790 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 TWNKQ96RR1 684 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 RBM15Q96T37 977 aaKnown RBP eCLIP4.85□□□□□ -1.632e-7■■□□□ 12.1
PPP4R3A-204ENST00000554574 UBXN6Q9BZV1 441 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 ELOVL4Q9GZR5 314 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 DDX47Q9H0S4 455 aaKnown RBP4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 CXCL16Q9H2A7 254 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 UBN1Q9NPG3 1134 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 RNF186Q9NXI6 227 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 GDAP2Q9NXN4 497 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 WDR35Q9P2L0 1181 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 TUBGCP4Q9UGJ1 667 aa4.85□□□□□ -1.63
PPP4R3A-204ENST00000554574 HMGXB4Q9UGU5 601 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms