RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 TSPAN33Q86UF1 283 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 HEATR4Q86WZ0 1026 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 NRSN1Q8IZ57 195 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 PELI3Q8N2H9 469 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 LGR4Q9BXB1 951 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 FRMD8Q9BZ67 464 aaPredicted RBP10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 PCDH9Q9HC56 1237 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 PADI4Q9UM07 663 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 GPSM3Q9Y4H4 160 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 TTLL3Q9Y4R7 772 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 PCDHA13Q9Y5I0 950 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 ALG6Q9Y672 507 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 SCN8AQ9UQD0 1980 aa10.39□□□□□ -0.75
PTCD2P1-201ENST00000554393 A0A087WV48 116 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 MTSS1O43312 755 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 CSO75390 466 aaKnown RBP10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 DXOO77932 396 aaKnown RBP10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 JCHAINP01591 159 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 MMP2P08253 660 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 CTPS1P17812 591 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 TGM2P21980 687 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 NOP2P46087 812 aaKnown RBP10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 SKOR1P84550 965 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 CDK3Q00526 305 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 PTSQ03393 145 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 AP1B1Q10567 949 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 ZBTB17Q13105 803 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 KIF26BQ2KJY2 2108 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 TFDP3Q5H9I0 405 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 PERM1Q5SV97 790 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 DENND2CQ68D51 928 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 KCTD16Q68DU8 428 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 RAET1GQ6H3X3 334 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 OGFOD3Q6PK18 319 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 MFSD7Q6UXD7 560 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 RBM44Q6ZP01 1051 aaKnown RBP10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 RD3Q7Z3Z2 195 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 RFX6Q8HWS3 928 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 TMTC1Q8IUR5 882 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 KATNAL2Q8IYT4 538 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 CNTD1Q8N815 330 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 KYQ8NBH2 561 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 GPR156Q8NFN8 814 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 SNIP1Q8TAD8 396 aaKnown RBP10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 IMP4Q96G21 291 aaKnown RBP10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 ADGRE3Q9BY15 652 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 CYP4F12Q9HCS2 524 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 TRNAU1APQ9NX07 287 aaKnown RBP10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 GPR34Q9UPC5 381 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 CHKBQ9Y259 395 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 SLC17A4Q9Y2C5 497 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 RAXQ9Y2V3 346 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 HYOU1Q9Y4L1 999 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 AK5Q9Y6K8 562 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 PTPRQQ9UMZ3 2332 aa10.38□□□□□ -0.75
PTCD2P1-201ENST00000554393 RGSL1A5PLK6 1076 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 ANKRD66B4E2M5 251 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 NTN3O00634 580 aaPredicted RBP10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 NDUFA10O95299 355 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 IPO7O95373 1038 aaKnown RBP10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 SOD1P00441 154 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 CEACAM5P06731 702 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 IVLP07476 585 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 PNLIPP16233 465 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 ACTN2P35609 894 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 CD86P42081 329 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 GPR1P46091 355 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 PEX6Q13608 980 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 PRKD1Q15139 912 aaPredicted RBP10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 PTPRRQ15256 657 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 QPCTQ16769 361 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 ISXQ2M1V0 245 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 IGF2-ASQ6U949 168 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 SPOCD1Q6ZMY3 1216 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 TAF8Q7Z7C8 310 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 NT5DC3Q86UY8 548 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 LSMEM2Q8N112 164 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 LPCAT1Q8NF37 534 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 EXD1Q8NHP7 514 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 KIAA1524Q8TCG1 905 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 GPBAR1Q8TDU6 330 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 TADA1Q96BN2 335 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 AP2M1Q96CW1 435 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 SCARF2Q96GP6 870 aaPredicted RBP10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 RBM41Q96IZ5 413 aaKnown RBP10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 CCDC3Q9BQI4 270 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 MLPHQ9BV36 600 aaPredicted RBP10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 GSDMCQ9BYG8 508 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 TMEM168Q9H0V1 697 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 RBSNQ9H1K0 784 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 SLC25A51Q9H1U9 297 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 ABCG8Q9H221 673 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 MRPL40Q9NQ50 206 aaKnown RBP10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 GULP1Q9UBP9 304 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 APPL1Q9UKG1 709 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 PCDHB1Q9Y5F3 818 aa10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 EPN1Q9Y6I3 576 aaPredicted RBP10.37□□□□□ -0.75
PTCD2P1-201ENST00000554393 hCG_1818297A0A087WSY0 165 aa10.36□□□□□ -0.75
PTCD2P1-201ENST00000554393 GOLGA6CA6NDK9 693 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms