RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 PAPOLAP51003 745 aaKnown RBP8.13□□□□□ -1.11
ACTN1-212ENST00000554158 ZNF143P52747 638 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-212ENST00000554158 POLR2FP61218 127 aaKnown RBP8.13□□□□□ -1.11
ACTN1-212ENST00000554158 CDK3Q00526 305 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 CTBSQ01459 385 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 FMO1Q01740 532 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 NSUN2Q08J23 767 aaKnown RBP eCLIP8.13□□□□□ -1.11
ACTN1-212ENST00000554158 ABHD18Q0P651 414 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 RALGDSQ12967 914 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 NR1D2Q14995 579 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 AFMIDQ63HM1 303 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 WDR59Q6PJI9 974 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 NYAP1Q6ZVC0 841 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 USP45Q70EL2 814 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 GALNT13Q8IUC8 556 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 SFTPA2Q8IWL1 248 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 ESX1Q8N693 406 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 AVL9Q8NBF6 648 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 ANKRD20A12PQ8NF67 263 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 NCSTNQ92542 709 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 SH3KBP1Q96B97 665 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 OR2M4Q96R27 311 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 EIF3CQ99613 913 aaKnown RBP8.13□□□□□ -1.11
ACTN1-212ENST00000554158 CNPY3Q9BT09 278 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 MAGEB5Q9BZ81 275 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 VPS16Q9H269 839 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 DHX35Q9H5Z1 703 aaKnown RBP8.13□□□□□ -1.11
ACTN1-212ENST00000554158 NLRC4Q9NPP4 1024 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 HAUS2Q9NVX0 235 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 OCIAD1Q9NX40 245 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 B4GALT6Q9UBX8 382 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 VPS4AQ9UN37 437 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 AP4E1Q9UPM8 1137 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 NEU3Q9UQ49 428 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 KCTD3Q9Y597 815 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 TNRC6AQ8NDV7 1962 aaKnown RBP8.13□□□□□ -1.11
ACTN1-212ENST00000554158 FLNCQ14315 2725 aa8.13□□□□□ -1.11
ACTN1-212ENST00000554158 TRBV23OR9-2A0A075B6M9 112 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PSMD11O00231 422 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 POLR1CO15160 346 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 NKX2-8O15522 239 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 SOCS5O75159 536 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 GADD45BO75293 160 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 STK17BO94768 372 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 CEACAM5P06731 702 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 IVLP07476 585 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 HSPA9P38646 679 aaKnown RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 EPHB1P54762 984 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 HHEXQ03014 270 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 FOXM1Q08050 763 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 IL10RBQ08334 325 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 LBRQ14739 615 aaKnown RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 CLEC16AQ2KHT3 1053 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PPP6R3Q5H9R7 873 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 MIIPQ5JXC2 388 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 ARTNQ5T4W7 220 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 KCTD16Q68DU8 428 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PPP1R2P3Q6NXS1 205 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 CYB5D1Q6P9G0 228 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 MARK2Q7KZI7 788 aaKnown RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 ZSWIM9Q86XI8 627 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PHF13Q86YI8 300 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 NAGSQ8N159 534 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 NEK11Q8NG66 645 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PATE1Q8WXA2 126 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 STARD8Q92502 1023 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 ECHDC3Q96DC8 303 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 RTP4Q96DX8 246 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 STAMBPL1Q96FJ0 436 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 DTD2Q96FN9 168 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 ABHD17AQ96GS6 310 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 COQ10AQ96MF6 247 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 CTRCQ99895 268 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 NAA15Q9BXJ9 866 aaKnown RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 TEX101Q9BY14 249 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 FRMD8Q9BZ67 464 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 SLC39A8Q9C0K1 460 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 LRRC19Q9H756 370 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 ZWILCHQ9H900 591 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PDFQ9HBH1 243 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 FAM207AQ9NSI2 230 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 CNOT8Q9UFF9 292 aaKnown RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 KLHL3Q9UH77 587 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 ZNHIT2Q9UHR6 403 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 NOCTQ9UK39 431 aaKnown RBP8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PILRAQ9UKJ1 303 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PHTF1Q9UMS5 762 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 PLAAQ9Y263 795 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 MAN2B2Q9Y2E5 1009 aa8.12□□□□□ -1.11
ACTN1-212ENST00000554158 CREBBPQ92793 2442 aa8.11□□□□□ -1.11
ACTN1-212ENST00000554158 PPM1DO15297 605 aa8.11□□□□□ -1.11
ACTN1-212ENST00000554158 PRPSAP2O60256 369 aa8.11□□□□□ -1.11
ACTN1-212ENST00000554158 KATNA1O75449 491 aa8.11□□□□□ -1.11
ACTN1-212ENST00000554158 HEXIM1O94992 359 aaKnown RBP8.11□□□□□ -1.11
ACTN1-212ENST00000554158 MAP3K6O95382 1288 aa8.11□□□□□ -1.11
ACTN1-212ENST00000554158 CCNYL3P0C7X3 344 aa8.11□□□□□ -1.11
ACTN1-212ENST00000554158 CA4P22748 312 aa8.11□□□□□ -1.11
ACTN1-212ENST00000554158 PSMA2P25787 234 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms