RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CCDC154A6NI56 674 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 F8VP50 259 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 ZBTB5O15062 677 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
SIX4-202ENST00000554079 ADAM11O75078 769 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 PTP4A3O75365 173 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 H2AFYO75367 372 aaKnown RBP9.54□□□□□ -0.88
SIX4-202ENST00000554079 HLA-DRAP01903 254 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 PRKCBP05771 671 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 ADRB2P07550 413 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 PSMA4P25789 261 aaKnown RBP9.54□□□□□ -0.88
SIX4-202ENST00000554079 MAGEA3P43357 314 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 RPS5P46782 204 aaKnown RBP9.54□□□□□ -0.88
SIX4-202ENST00000554079 CENPAP49450 140 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 RPL14P50914 215 aaKnown RBP9.54□□□□□ -0.88
SIX4-202ENST00000554079 SLC7A2P52569 658 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 SLC12A2P55011 1212 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 ARPP19P56211 112 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 EVA1CP58658 441 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 PDK2Q15119 407 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 LRRC26Q2I0M4 334 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 ZIK1Q3SY52 487 aaPredicted RBP9.54□□□□□ -0.88
SIX4-202ENST00000554079 PPM1JQ5JR12 505 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 ZNF704Q6ZNC4 412 aaPredicted RBP9.54□□□□□ -0.88
SIX4-202ENST00000554079 FAM178BQ8IXR5 827 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 TAGAPQ8N103 731 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 CCNYL1Q8N7R7 359 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 SLC44A5Q8NCS7 719 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 SLAIN1Q8ND83 568 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 ELMO3Q96BJ8 720 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 NODALQ96S42 347 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 GAD1Q99259 594 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 SMOC2Q9H3U7 446 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 MTMR10Q9NXD2 777 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 FNIP2Q9P278 1114 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 ANAPC2Q9UJX6 822 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 PCDHB3Q9Y5E6 796 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 PCDHGB6Q9Y5F9 930 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 PCDHA11Q9Y5I1 949 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 MEIOCA2RUB1 952 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 USP17L5A8MUK1 530 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 I3L521 148 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 NCAM2O15394 837 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 AKR7A2O43488 359 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ITGB3P05106 788 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 HMGN1P05114 100 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 HDCP19113 662 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 HMGCLP35914 325 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 MAGEA6P43360 314 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 EMX1Q04741 257 aaPredicted RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 STX5Q13190 355 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 IKZF1Q13422 519 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 SEMA5AQ13591 1074 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ZMYND11Q15326 602 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 PITRM1Q5JRX3 1037 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 FAM209BQ5JX69 171 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TPRG1LQ5T0D9 272 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ZBTB37Q5TC79 503 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TXNDC11Q6PKC3 985 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ENOSF1Q7L5Y1 443 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 RAB43Q86YS6 212 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 SPPL2CQ8IUH8 684 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TCTE3Q8IZS6 198 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 C8orf59Q8N0T1 100 aaPredicted RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 MPP5Q8N3R9 675 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TMEM199Q8N511 208 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ZBTB44Q8NCP5 570 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 PAPD5Q8NDF8 572 aaKnown RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 ZMIZ2Q8NF64 920 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 PJA1Q8NG27 643 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 VANGL1Q8TAA9 524 aaPredicted RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 SIGLEC10Q96LC7 697 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 GHITMQ9H3K2 345 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TOR3AQ9H497 397 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 FBXO40Q9UH90 709 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ADGRE2Q9UHX3 823 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 CACNG2Q9Y698 323 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 A3GALT2U3KPV4 340 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 SBF2Q86WG5 1849 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 NRCAMQ92823 1304 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TP53BP1Q12888 1972 aaPredicted RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 A0A0U1RQS6 177 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TCRBV5S1A1TA0A578 114 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 WDR64B1ANS9 1081 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 SLC1A7O00341 560 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 MRASO14807 208 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 ARHGEF9O43307 516 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TRIM13O60858 407 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 LTFP02788 710 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 S100A6P06703 90 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 RETP07949 1114 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 CLEC2LP0C7M8 214 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 AGXTP21549 392 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TGM2P21980 687 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 PTX3P26022 381 aaPredicted RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 IL12RB1P42701 662 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 MAGEA12P43365 314 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 CCR10P46092 362 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms