RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 RBM15Q96T37 977 aaKnown RBP eCLIP7.76□□□□□ -1.17
ABCD4-220ENST00000553998 MAK16Q9BXY0 300 aaKnown RBP7.76□□□□□ -1.17
ABCD4-220ENST00000553998 HECAQ9UBI9 543 aaPredicted RBP7.76□□□□□ -1.17
ABCD4-220ENST00000553998 GGT7Q9UJ14 662 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 PYCARDQ9ULZ3 195 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 GPR34Q9UPC5 381 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 EFR3BQ9Y2G0 817 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 DGKBQ9Y6T7 804 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 LRRK1Q38SD2 2015 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 ANKRD36A6QL64 1941 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 ZSCAN5CA6NGD5 496 aaPredicted RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 ARHGAP42A6NI28 874 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 RASA4BC9J798 803 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 STMND1H3BQB6 276 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 CAPN5O15484 640 aaPredicted RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 DDX3YO15523 660 aaKnown RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 RASA4O43374 803 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 NUDT21O43809 227 aaKnown RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 TM7SF2O76062 418 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 RASGRP1O95267 797 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 GSRP00390 522 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 CD48P09326 243 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 TNNT1P13805 278 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 MX2P20592 715 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 AMPD1P23109 780 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 CDKN2BP42772 138 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 GEMIN4P57678 1058 aaKnown RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 B4GALNT1Q00973 533 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 HLTFQ14527 1009 aaKnown RBP eCLIP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 POLD3Q15054 466 aaPredicted RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 PAFAH1B3Q15102 231 aaKnown RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 RPS6KA1Q15418 735 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 ALG11Q2TAA5 492 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 TMEM52BQ4KMG9 183 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 TFDP3Q5H9I0 405 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 MEI1Q5TIA1 1274 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 TMEM164Q5U3C3 297 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 SLC9A4Q6AI14 798 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 MFSD7Q6UXD7 560 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 SPOCD1Q6ZMY3 1216 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 SPRED1Q7Z699 444 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 C17orf82Q86X59 251 aaPredicted RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 PQLC3Q8N755 202 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 OR7D4Q8NG98 312 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 CASKIN2Q8WXE0 1202 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 ALG3Q92685 438 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 ARHGEF2Q92974 986 aaKnown RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 MIB2Q96AX9 1013 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 RNF25Q96BH1 459 aaPredicted RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 TRIM44Q96DX7 344 aaPredicted RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 C1QTNF7Q9BXJ2 289 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 OSBPL1AQ9BXW6 950 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 KLC2Q9H0B6 622 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 NOL6Q9H6R4 1146 aaKnown RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 LRRC19Q9H756 370 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 SYNDIG1Q9H7V2 258 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 ATP13A1Q9HD20 1204 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 NDFIP2Q9NV92 336 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 TRMT1Q9NXH9 659 aaKnown RBP7.75□□□□□ -1.17
ABCD4-220ENST00000553998 DNAI1Q9UI46 699 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 HPCAL4Q9UM19 191 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 JRKLQ9Y4A0 524 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 RNF215Q9Y6U7 377 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
ABCD4-220ENST00000553998 RP1P56715 2156 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 hCG_1818297A0A087WSY0 165 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 BLACEA4D250 179 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 ENO4A6NNW6 628 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 NEMP1O14524 444 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 APOL1O14791 398 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 HGSO14964 777 aaPredicted RBP7.74□□□□□ -1.17
ABCD4-220ENST00000553998 B4GAT1O43505 415 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 KDELR3O43731 214 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 MMP20O60882 483 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 POP4O95707 220 aaKnown RBP7.74□□□□□ -1.17
ABCD4-220ENST00000553998 CCL4P13236 92 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 CTSEP14091 401 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 ACVRL1P37023 503 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 CCR10P46092 362 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 MARCKSL1P49006 195 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 NR2C2P49116 596 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 ATP1A2P50993 1020 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SUOXP51687 545 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SRP54P61011 504 aaKnown RBP7.74□□□□□ -1.17
ABCD4-220ENST00000553998 MMRN1Q13201 1228 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SQSTM1Q13501 440 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 NFATC4Q14934 902 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 NR1D2Q14995 579 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 C16orf72Q14CZ0 275 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 MYLK3Q32MK0 819 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 CRTC2Q53ET0 693 aaPredicted RBP7.74□□□□□ -1.17
ABCD4-220ENST00000553998 INO80DQ53TQ3 878 aaPredicted RBP7.74□□□□□ -1.17
ABCD4-220ENST00000553998 TMCO4Q5TGY1 634 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 NCBP2-AS2Q69YL0 99 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 BBS12Q6ZW61 710 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 BZW1Q7L1Q6 419 aaKnown RBP7.74□□□□□ -1.17
ABCD4-220ENST00000553998 ZNF438Q7Z4V0 828 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 TTC7BQ86TV6 843 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms