RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 BCL2L1Q07817 233 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 PTP4A2Q12974 167 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 ACOX1Q15067 660 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 IFI16Q16666 785 aaKnown RBP8.86□□□□□ -0.99
TDP1-208ENST00000553989 AMZ1Q400G9 498 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 C14orf28Q4W4Y0 310 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 CERCAMQ5T4B2 595 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 TMEM164Q5U3C3 297 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 ALS2CLQ60I27 953 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 SPRED1Q7Z699 444 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 VASH2Q86V25 355 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 PHF13Q86YI8 300 aaPredicted RBP8.86□□□□□ -0.99
TDP1-208ENST00000553989 UMODL1-AS1Q8N2C9 162 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 PLA2G15Q8NCC3 412 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.86□□□□□ -0.99
TDP1-208ENST00000553989 OR1E3Q8WZA6 343 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 USP7Q93009 1102 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 VOPP1Q96AW1 172 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 TMEM159Q96B96 161 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 RBM15Q96T37 977 aaKnown RBP eCLIP8.86□□□□□ -0.99
TDP1-208ENST00000553989 PCDHB18PQ96TA0 734 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 RHOXF2Q9BQY4 288 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 WDR26Q9H7D7 661 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 CYP4F12Q9HCS2 524 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 FGF22Q9HCT0 170 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 GPATCH2LQ9NWQ4 482 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 GOLGA6AQ9NYA3 693 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 LRIT1Q9P2V4 623 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 SNX12Q9UMY4 172 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 SIK3Q9Y2K2 1263 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 DGKBQ9Y6T7 804 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 RNF215Q9Y6U7 377 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 CHD5Q8TDI0 1954 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 TMEM202A6NGA9 273 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 RHPN2P1A8MT19 583 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 WASH4PA8MWX3 477 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 EPHB6O15197 1021 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 NVLO15381 856 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 ZW10O43264 779 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 BUB1BO60566 1050 aaPredicted RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 PRAMEF11O60813 436 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 FAM87AP0C7U9 286 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 PSMA2P25787 234 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 ALDH4A1P30038 563 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 PAPOLAP51003 745 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 SCNN1BP51168 640 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 RPL7AP62424 266 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 VSNL1P62760 191 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 POLR2LP62875 67 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 NFKB2Q00653 900 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 DENND2CQ68D51 928 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 KCTD16Q68DU8 428 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 MON1BQ7L1V2 547 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 SRLQ86TD4 932 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 ZFAND4Q86XD8 727 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 ZSWIM9Q86XI8 627 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 TSEN2Q8NCE0 465 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 GPR156Q8NFN8 814 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 PDCD6IPQ8WUM4 868 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 JPH3Q8WXH2 748 aaPredicted RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 FUBP1Q96AE4 644 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 CNPY3Q9BT09 278 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 TMEM168Q9H0V1 697 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 DHX35Q9H5Z1 703 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 CARS2Q9HA77 564 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 PDFQ9HBH1 243 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 RDH14Q9HBH5 336 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 FOXJ2Q9P0K8 574 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 APPL1Q9UKG1 709 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 AP4E1Q9UPM8 1137 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 HYOU1Q9Y4L1 999 aa8.85□□□□□ -0.99
TDP1-208ENST00000553989 ASH1LQ9NR48 2969 aaKnown RBP8.85□□□□□ -0.99
TDP1-208ENST00000553989 PRSS38A1L453 326 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 GRID2IPA4D2P6 1211 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 BTNL10A8MVZ5 291 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 PDE2AO00408 941 aaPredicted RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 CES2O00748 559 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 NUDT21O43809 227 aaKnown RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 NOBOXO60393 691 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 CPNE6O95741 557 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 ATP1A1P05023 1023 aaKnown RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 ITGB2P05107 769 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 SFTPCP11686 197 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 PNLIPP16233 465 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 NFKBIAP25963 317 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 HTR7P34969 479 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 ETV5P41161 510 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 RGRP47804 291 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 CSRP3P50461 194 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 ATP1A2P50993 1020 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 NDST2P52849 883 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 HNRNPH2P55795 449 aaKnown RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 MAZP56270 477 aaKnown RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 ZFP36L1Q07352 338 aaKnown RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 ILF3Q12906 894 aaKnown RBP eCLIP8.84□□□□□ -0.99
TDP1-208ENST00000553989 RALGDSQ12967 914 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 HLTFQ14527 1009 aaKnown RBP eCLIP8.84□□□□□ -0.99
TDP1-208ENST00000553989 ZNF235Q14590 738 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 AGERQ15109 404 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 ASTE1Q2TB18 679 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms