RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TRMT1LQ7Z2T5 733 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 RPAP2Q8IXW5 612 aaPredicted RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 RBFAQ8N0V3 343 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ADSSL1Q8N142 457 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 OR8H3Q8N146 312 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 NUP93Q8N1F7 819 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 WDTC1Q8N5D0 677 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 TMCO5AQ8N6Q1 288 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 FRMD1Q8N878 549 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 FSIP1Q8NA03 581 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 MAPK1IP1LQ8NDC0 245 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 LRRC8CQ8TDW0 803 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 CREB3L4Q8TEY5 395 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 HDAC7Q8WUI4 952 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 RUFY2Q8WXA3 655 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 CCDC47Q96A33 483 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 TXNDC15Q96J42 360 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ZNF385AQ96PM9 386 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 GBP5Q96PP8 586 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 FNBP1Q96RU3 617 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 EYA3Q99504 573 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 APOL6Q9BWW8 343 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 HDHD5Q9BXW7 423 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 TWSG1Q9GZX9 223 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 RANBP17Q9H2T7 1088 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 RABEP2Q9H5N1 569 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 STN1Q9H668 368 aaKnown RBP2.36□□□□□ -2.03
SRP54-204ENST00000553923 BRF2Q9HAW0 419 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 PLEKHA2Q9HB19 425 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 PDE11AQ9HCR9 933 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ZFP57Q9NU63 452 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ABCF3Q9NUQ8 709 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ALKBH4Q9NXW9 302 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 CDH22Q9UJ99 828 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ANAPC5Q9UJX4 755 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 ODF2LQ9ULJ1 636 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 SUFUQ9UMX1 484 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 PCDHA10Q9Y5I2 948 aa2.36□□□□□ -2.03
SRP54-204ENST00000553923 IGHV4OR15-8A0A075B7B6 117 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 C17orf113A0A1B0GUU1 675 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.35□□□□□ -2.03
SRP54-204ENST00000553923 A0A1W2PQ09 198 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 FAM90A18PA6NE21 464 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 TMEM247A6NEH6 219 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 FAM90A16PA6NEW6 464 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 FAM90A9PA6NNJ1 464 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 FAM90A5PA8MXJ8 464 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 GRM8O00222 908 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 SYN3O14994 580 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 SEPT4O43236 478 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 HEXIM1O94992 359 aaKnown RBP2.35□□□□□ -2.03
SRP54-204ENST00000553923 CCNDBP1O95273 360 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 PMS2P2O95744 297 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 BAG2O95816 211 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 TFRCP02786 760 aaKnown RBP2.35□□□□□ -2.03
SRP54-204ENST00000553923 ATP5BP06576 529 aaKnown RBP2.35□□□□□ -2.03
SRP54-204ENST00000553923 FAM90A15PP0C7V4 464 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 FAM90A14PP0C7W9 464 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 THEGLP0DJG4 465 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 LAMP2P13473 410 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 SAT1P21673 171 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 EPHA8P29322 1005 aaPredicted RBP2.35□□□□□ -2.03
SRP54-204ENST00000553923 TYK2P29597 1187 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 MSH2P43246 934 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 LMAN1P49257 510 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 MCM2P49736 904 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 PEX5P50542 639 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 CDH15P55291 814 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 GOLGA8FQ08AF8 430 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 AP1B1Q10567 949 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 AIMP1Q12904 312 aaKnown RBP2.35□□□□□ -2.03
SRP54-204ENST00000553923 CAMK2DQ13557 499 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 ALKBH1Q13686 389 aaKnown RBP2.35□□□□□ -2.03
SRP54-204ENST00000553923 CAMK1Q14012 370 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 DHX34Q14147 1143 aaKnown RBP2.35□□□□□ -2.03
SRP54-204ENST00000553923 NAA25Q14CX7 972 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 BAK1Q16611 211 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 ODF2Q5BJF6 829 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 FAM69BQ5VUD6 431 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 DGAT2L7PQ6IED9 249 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 RAPH1Q70E73 1250 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 RASGRP2Q7LDG7 609 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 KRT74Q7RTS7 529 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 RNF144BQ7Z419 303 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 SLFN11Q7Z7L1 901 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 ADGRG6Q86SQ4 1221 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 SERPINA11Q86U17 422 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 EPHX4Q8IUS5 362 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 THNSL1Q8IYQ7 743 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 VPS52Q8N1B4 723 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 USP38Q8NB14 1042 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 RFWD2Q8NHY2 731 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 NFKBIDQ8NI38 313 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 GPT2Q8TD30 523 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 SCFD2Q8WU76 684 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 SECTM1Q8WVN6 248 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 NCSTNQ92542 709 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 KCNJ9Q92806 393 aa2.35□□□□□ -2.03
SRP54-204ENST00000553923 VPS33AQ96AX1 596 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms