RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 DGKBQ9Y6T7 804 aa9.31□□□□□ -0.92
CHD8-206ENST00000553870 PCNX2A6NKB5 2137 aa9.31□□□□□ -0.92
CHD8-206ENST00000553870 WDR87Q6ZQQ6 2873 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 USP27XA6NNY8 438 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 AP3B1O00203 1094 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 PGRMC1O00264 195 aaKnown RBP9.3□□□□□ -0.92
CHD8-206ENST00000553870 SCAMP1O15126 338 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 TNFSF14O43557 240 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 SUN1O94901 812 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 METTL18O95568 372 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 CRTAMO95727 393 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 AP2A1O95782 977 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 IFNB1P01574 187 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 ALPPL2P10696 532 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 CDK4P11802 303 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 DGKAP23743 735 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 NOVA1P51513 510 aaKnown RBP9.3□□□□□ -0.92
CHD8-206ENST00000553870 GDF10P55107 478 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 SRP54P61011 504 aaKnown RBP9.3□□□□□ -0.92
CHD8-206ENST00000553870 CDK3Q00526 305 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 FOXK2Q01167 660 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 SNX1Q13596 522 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 PEX6Q13608 980 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 LAMB3Q13751 1172 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 PTPRRQ15256 657 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 ELOCQ15369 112 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 TAF1AQ15573 450 aaPredicted RBP9.3□□□□□ -0.92
CHD8-206ENST00000553870 TRIP6Q15654 476 aaKnown RBP9.3□□□□□ -0.92
CHD8-206ENST00000553870 CYP1B1Q16678 543 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 PPM1JQ5JR12 505 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 TPRG1LQ5T0D9 272 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 FAM182AQ5T1J6 154 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 HENMT1Q5T8I9 393 aaKnown RBP9.3□□□□□ -0.92
CHD8-206ENST00000553870 FAXCQ5TGI0 409 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 RAET1GQ6H3X3 334 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 HEATR4Q86WZ0 1026 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 PHACTR4Q8IZ21 702 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 SLC25A45Q8N413 288 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 TRAM1L1Q8N609 369 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 PRELID2Q8N945 189 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 DEFB124Q8NES8 71 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 SCAMP4Q969E2 229 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 EID2BQ96D98 161 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 HIC2Q96JB3 615 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 PLEKHG4BQ96PX9 1271 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 SMIM14Q96QK8 99 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 NAPGQ99747 312 aaPredicted RBP9.3□□□□□ -0.92
CHD8-206ENST00000553870 TBL1YQ9BQ87 522 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 GORASP1Q9BQQ3 440 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 ZSCAN5AQ9BUG6 496 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 FICDQ9BVA6 458 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 RIOK2Q9BVS4 552 aaKnown RBP9.3□□□□□ -0.92
CHD8-206ENST00000553870 RMI1Q9H9A7 625 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 EVA1BQ9NVM1 165 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 NCKIPSDQ9NZQ3 722 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 KLQ9UEF7 1012 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 SHOC2Q9UQ13 582 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 SLC17A4Q9Y2C5 497 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 PKP3Q9Y446 797 aa9.3□□□□□ -0.92
CHD8-206ENST00000553870 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHD8-206ENST00000553870 LRRK1Q38SD2 2015 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 CFAP54Q96N23 3096 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 GOLGA6L10A0A0M3HER8 536 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 CTAGE9A4FU28 777 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 GPR89AB7ZAQ6 455 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 LMO7DNF2Z398 122 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 K7ESM1 405 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 AQP9O43315 295 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 TRIM16O95361 564 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 GAS8O95995 478 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 GPR89BP0CG08 455 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 CTSEP14091 401 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 LPOP22079 712 aaPredicted RBP9.29□□□□□ -0.92
CHD8-206ENST00000553870 CDK16Q00536 496 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 IL9RQ01113 521 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 MSLNQ13421 630 aaPredicted RBP9.29□□□□□ -0.92
CHD8-206ENST00000553870 SEMA5AQ13591 1074 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 DENND5AQ6IQ26 1287 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 PSAPL1Q6NUJ1 521 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 RFLNAQ6ZTI6 216 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 GSTA5Q7RTV2 222 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 GATAD2AQ86YP4 633 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 HID1Q8IV36 788 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 TTC30BQ8N4P2 665 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 PDCD7Q8N8D1 485 aaKnown RBP9.29□□□□□ -0.92
CHD8-206ENST00000553870 FAM181AQ8N9Y4 354 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 OR4C6Q8NH72 309 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 BLOC1S5Q8TDH9 187 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 COG1Q8WTW3 980 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 SCG3Q8WXD2 468 aaKnown RBP9.29□□□□□ -0.92
CHD8-206ENST00000553870 MAGOHBQ96A72 148 aaKnown RBP9.29□□□□□ -0.92
CHD8-206ENST00000553870 SCARF2Q96GP6 870 aaPredicted RBP9.29□□□□□ -0.92
CHD8-206ENST00000553870 COX14Q96I36 57 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 WDR24Q96S15 920 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 LGR4Q9BXB1 951 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 SPATA16Q9BXB7 569 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 FRMD8Q9BZ67 464 aaPredicted RBP9.29□□□□□ -0.92
CHD8-206ENST00000553870 ETNK1Q9HBU6 452 aa9.29□□□□□ -0.92
CHD8-206ENST00000553870 EIF2B3Q9NR50 452 aaKnown RBP9.29□□□□□ -0.92
CHD8-206ENST00000553870 TRNAU1APQ9NX07 287 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms