RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 QKIQ96PU8 341 aaKnown RBP eCLIP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 RBM15Q96T37 977 aaKnown RBP eCLIP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 MLPHQ9BV36 600 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 TDRD1Q9BXT4 1180 aaKnown RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 CEP41Q9BYV8 373 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 SLC13A1Q9BZW2 595 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 SLC25A51Q9H1U9 297 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 IL21RQ9HBE5 538 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 GLOD4Q9HC38 313 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 DNAJC28Q9NX36 388 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 SAE1Q9UBE0 346 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 FAM153AQ9UHL3 310 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 RSPH14Q9UHP6 348 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 APOBEC2Q9Y235 224 aaKnown RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 CHKBQ9Y259 395 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 CA5BQ9Y2D0 317 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PPP2R2CQ9Y2T4 447 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 COQ6Q9Y2Z9 468 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 SLCO1B1Q9Y6L6 691 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 GVINP1Q7Z2Y8 2422 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 POM121BA6NF01 834 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 KCNN4O15554 427 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 GJB3O75712 270 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 ANXA9O76027 345 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 HEXIM1O94992 359 aaKnown RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 TRIM16O95361 564 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 RBP3P10745 1247 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 PYGMP11217 842 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 CD59P13987 128 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 CTSEP14091 401 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 SNRPBP14678 240 aaKnown RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 PTPN3P26045 913 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 EPHA8P29322 1005 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 DNAJA1P31689 397 aaKnown RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 RXRGP48443 463 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 GEMP55040 296 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 SIM1P81133 766 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 IL9RQ01113 521 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 OTUD4Q01804 1114 aaKnown RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 BNC1Q01954 994 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 SEMG2Q02383 582 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 NIPAL4Q0D2K0 466 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 ZBTB17Q13105 803 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 NOMO1Q15155 1222 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 IRF4Q15306 451 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 TRIP6Q15654 476 aaKnown RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 SLC14A2Q15849 920 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 PCSK7Q16549 785 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 PRAMEF14Q5SWL7 426 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 FAXCQ5TGI0 409 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 LIPIQ6XZB0 460 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 ZNF662Q6ZS27 426 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 KDELC2Q7Z4H8 507 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 ZSWIM9Q86XI8 627 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 ARRDC2Q8TBH0 407 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 ACTL9Q8TC94 416 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 IMP4Q96G21 291 aaKnown RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 HES6Q96HZ4 224 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 BMFQ96LC9 184 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 TEKT5Q96M29 485 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 FSD1LQ9BXM9 530 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 FRMD8P1Q9BZ68 369 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 ZCCHC2Q9C0B9 1178 aaKnown RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 WDR26Q9H7D7 661 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 PHPT1Q9NRX4 125 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 RAD18Q9NS91 495 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 PKD2L2Q9NZM6 624 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 SPASTQ9UBP0 616 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 FTSJ1Q9UET6 329 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 MOSPD1Q9UJG1 213 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 PACSIN2Q9UNF0 486 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 CAPN6Q9Y6Q1 641 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 NYNRINQ9P2P1 1898 aaKnown RBP8.34□□□□□ -1.07
PSEN1-209ENST00000553855 NUP205Q92621 2012 aa8.34□□□□□ -1.07
PSEN1-209ENST00000553855 CHD5Q8TDI0 1954 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 MYO15AQ9UKN7 3530 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 CEP192Q8TEP8 1941 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 A0A0J9YYE9 177 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 C1orf232A0A0U1RR37 186 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 SPTY2D1-AS1A0A0U1RR47 76 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 CAPN8A6NHC0 703 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 C10orf142B7Z368 130 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 TM4SF5O14894 197 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 RAD51BO15315 384 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 KIF5CO60282 957 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 PMPCBO75439 489 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 RASGRP1O95267 797 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 LDOC1O95751 146 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 TNFP01375 233 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 TRBC1P01850 177 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 PDHA1P08559 390 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 TSHRP16473 764 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 NFKB1P19838 968 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 RBL1P28749 1068 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 GSTT1P30711 240 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 HNF1BP35680 557 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 IGFALSP35858 605 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 GPR1P46091 355 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 DUSP3P51452 185 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 PFN3P60673 137 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms