RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 E9PAM4 449 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 SLCO1B7G3V0H7 640 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 PEX11BO96011 259 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 SLC10A3P09131 477 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 FGFR3P22607 806 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 MYF6P23409 242 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 CYP2C18P33260 490 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 RPL14P50914 215 aaKnown RBP12.25□□□□□ -0.45
SHMT2-207ENST00000553837 NME5P56597 212 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 TSPY1Q01534 308 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 PRKCZQ05513 592 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 ITGADQ13349 1161 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 PMS2P3Q13401 168 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 USP10Q14694 798 aaKnown RBP12.25□□□□□ -0.45
SHMT2-207ENST00000553837 DDR2Q16832 855 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 TRIM16LQ309B1 348 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 AARS2Q5JTZ9 985 aaKnown RBP12.25□□□□□ -0.45
SHMT2-207ENST00000553837 MFSD14CQ5VZR4 134 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 LINC00523Q86TU6 105 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 THEM5Q8N1Q8 247 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 FAM156AQ8NDB6 213 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 KLHDC9Q8NEP7 349 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 CNDP2Q96KP4 475 aaKnown RBP12.25□□□□□ -0.45
SHMT2-207ENST00000553837 GPR78Q96P69 363 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 TASP1Q9H6P5 420 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 ABI2Q9NYB9 513 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-207ENST00000553837 NCKIPSDQ9NZQ3 722 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 HACD3Q9P035 362 aa12.25□□□□□ -0.45
SHMT2-207ENST00000553837 AAR2Q9Y312 384 aaKnown RBP12.25□□□□□ -0.45
SHMT2-207ENST00000553837 TTC24A2A3L6 582 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-207ENST00000553837 BMP2P12643 396 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 GRK4P32298 578 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 PSME3P61289 254 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 PRKCQQ04759 706 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 YWHAHQ04917 246 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-207ENST00000553837 CLLU1OSQ5K130 101 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 ZYG11AQ6WRX3 759 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 CAMK1DQ8IU85 385 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 CNTN4Q8IWV2 1026 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 TTC9BQ8N6N2 239 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 MFSD2AQ8NA29 543 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 LINC01599Q8WXQ3 324 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 PPWD1Q96BP3 646 aaKnown RBP12.24□□□□□ -0.45
SHMT2-207ENST00000553837 PPP1R36Q96LQ0 422 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 SPC25Q9HBM1 224 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-207ENST00000553837 RUVBL2Q9Y230 463 aaKnown RBP12.24□□□□□ -0.45
SHMT2-207ENST00000553837 CDYLQ9Y232 598 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 TCAF1Q9Y4C2 921 aa12.24□□□□□ -0.45
SHMT2-207ENST00000553837 TCRBV3S1A0A5B6 114 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TCAF2A6NFQ2 919 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TMX2-CTNND1H3BSU7 103 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TNFRSF10AO00220 468 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 FGF10O15520 208 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 JUNP05412 331 aaKnown RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TYMPP19971 482 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 CD247P20963 164 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 JAK1P23458 1154 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 SLC1A2P43004 574 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 GRIA4P48058 902 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 MLLT6P55198 1093 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 GRSF1Q12849 480 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 MBTPS1Q14703 1052 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 RAB39AQ14964 217 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 ZNF789Q5FWF6 425 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TSTD2Q5T7W7 516 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 IRAK1BP1Q5VVH5 260 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 NXNQ6DKJ4 435 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 RANBP10Q6VN20 620 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 CHSY3Q70JA7 882 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 CPNE9Q8IYJ1 553 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 ZNF683Q8IZ20 524 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 LSMEM2Q8N112 164 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 FSTL5Q8N475 847 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 SLC15A4Q8N697 577 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 RTL3Q8N8U3 475 aaKnown RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 PDPRQ8NCN5 879 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 GPR152Q8TDT2 470 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 SLCO4A1Q96BD0 722 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 NPAS2Q99743 824 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TUBA1CQ9BQE3 449 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 CATSPERBQ9H7T0 1116 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TREX1Q9NSU2 369 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 RIC8BQ9NVN3 520 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 PCDHB8Q9UN66 801 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 NOX1Q9Y5S8 564 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 J3KR12 359 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 J3QRK9 145 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 PSMD3O43242 534 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 DLX3O60479 287 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 ANXA9O76027 345 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 CNTN5O94779 1100 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TBX18O95935 607 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 ELNP15502 786 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TFEBP19484 476 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 RPL10P27635 214 aaKnown RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TRAF2Q12933 501 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 MAPRE1Q15691 268 aaKnown RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 PCSK7Q16549 785 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 CYP2A13Q16696 494 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms