RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 RXRGP48443 463 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 TRAPPC10P48553 1259 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 VAV2P52735 878 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 ZXDBP98169 803 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 SAFBQ15424 915 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-223ENST00000553686 ZBTB6Q15916 424 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 KYAT1Q16773 422 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 GEN1Q17RS7 908 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 SLC45A4Q5BKX6 768 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 KCNT1Q5JUK3 1230 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 SDHAF4Q5VUM1 108 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 BLIDQ8IZY5 108 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 AOPEPQ8N6M6 819 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 C3orf20Q8ND61 904 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 UCMAQ8WVF2 138 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 KIFAP3Q92845 792 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 BIRC7Q96CA5 298 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 CEP295NLQ96MC4 621 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 BTBD1Q9H0C5 482 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 C6orf106Q9H6K1 298 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-223ENST00000553686 ERVMER34-1Q9H9K5 563 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 DNAJC17Q9NVM6 304 aaKnown RBP6.12□□□□□ -1.43
ATXN3-223ENST00000553686 SEPT10Q9P0V9 454 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 VPS54Q9P1Q0 977 aa6.12□□□□□ -1.43
ATXN3-223ENST00000553686 ORC3Q9UBD5 711 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-223ENST00000553686 NBASA2RRP1 2371 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 hCG_2014768A0A024R1R8 64 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 LRRC14BA6NHZ5 514 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 CCDC169A6NNP5 214 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 CDRT15L2A8MXV6 281 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 F2RL2O00254 374 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 CCNT1O60563 726 aaKnown RBP6.11□□□□□ -1.43
ATXN3-223ENST00000553686 VPS4BO75351 444 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 SEMA4FO95754 770 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 IL33O95760 270 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 DDAH2O95865 285 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 NUDT3O95989 172 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 GP1BAP07359 652 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 THEGLP0DJG4 465 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 MBL2P11226 248 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-223ENST00000553686 HARSP12081 509 aaKnown RBP6.11□□□□□ -1.43
ATXN3-223ENST00000553686 CYP2F1P24903 491 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 DCTP40126 519 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 ZNF844Q08AG5 666 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 MPP3Q13368 585 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 ISXQ2M1V0 245 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 C3orf38Q5JPI3 329 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 SFMBT2Q5VUG0 894 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 SPATA1Q5VX52 437 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 LAYNQ6UX15 382 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 NEK8Q86SG6 692 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 TMEM25Q86YD3 366 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 CCDC83Q8IWF9 413 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 SCN4BQ8IWT1 228 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 KLHL32Q96NJ5 620 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 KIFC3Q9BVG8 833 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 RNF26Q9BY78 433 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-223ENST00000553686 SYNPO2LQ9H987 977 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 SGK2Q9HBY8 427 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 AASDHPPTQ9NRN7 309 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 VSX1Q9NZR4 365 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-223ENST00000553686 DKK3Q9UBP4 350 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 VPS4AQ9UN37 437 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 SATB2Q9UPW6 733 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 CDYLQ9Y232 598 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 POLHQ9Y253 713 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 PCDHA3Q9Y5H8 950 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 SLCO1B1Q9Y6L6 691 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 ZFHX3Q15911 3703 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 KNL1Q8NG31 2342 aa6.11□□□□□ -1.43
ATXN3-223ENST00000553686 BOD1L1Q8NFC6 3051 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 LRBAP50851 2863 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 NF1P21359 2839 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 MYH9P35579 1960 aaKnown RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 A0A087WWV3 80 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 A0A1W2PPC4 97 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 TTC26A0AVF1 554 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 ARHGEF35A5YM69 484 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 ZNF840PA6NDX5 716 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 PRRT4C9JH25 899 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 CLDN3O15551 220 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 CACNG3O60359 315 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 MAGEC1O60732 1142 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 TOM1L1O75674 476 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 TNFSF15O95150 251 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 CD38P28907 300 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 ACSL1P33121 698 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 ADRA1BP35368 520 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 CDH8P55286 799 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 ZBTB16Q05516 673 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 SPAG1Q07617 926 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 HDAC1Q13547 482 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 SHBQ15464 509 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 CFAP221Q4G0U5 840 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 THEMIS2Q5TEJ8 643 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 WSCD1Q658N2 575 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms