RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TUFMP49411 452 aaKnown RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 ZNF140P52738 457 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 CHN2P52757 468 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 MRPS22P82650 360 aaKnown RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 RHDQ02161 417 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 FOLH1Q04609 750 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 LRRC36Q1X8D7 754 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 UGT3A2Q3SY77 523 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 C8orf82Q6P1X6 216 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 ZNF549Q6P9A3 640 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 LGI2Q8N0V4 545 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 NKAPQ8N5F7 415 aaKnown RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 TTC9BQ8N6N2 239 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 GOLM1Q8NBJ4 401 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 TMA16Q96EY4 203 aaKnown RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 DCUN1D1Q96GG9 259 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 CASD1Q96PB1 797 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 TUBGCP5Q96RT8 1024 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 ATOH8Q96SQ7 321 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 CCT7Q99832 543 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 HOPXQ9BPY8 73 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 CINPQ9BW66 212 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 C1QTNF3Q9BXJ4 246 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 UNKQ9C0B0 810 aaKnown RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 CCDC68Q9H2F9 335 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 CWH43Q9H720 699 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 SUDS3Q9H7L9 328 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 ACSS2Q9NR19 701 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 POLR3BQ9NW08 1133 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 UBA2Q9UBT2 640 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 CRYL1Q9Y2S2 319 aa12.89□□□□□ -0.35
SHMT2-205ENST00000553474 MTF2Q9Y483 593 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-205ENST00000553474 EIF4E1BA6NMX2 242 aaKnown RBP12.88□□□□□ -0.35
SHMT2-205ENST00000553474 SLC38A8A6NNN8 435 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 TRIM24O15164 1050 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 INSIG1O15503 277 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 DPP6P42658 865 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 PKNOX1P55347 436 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 MS4A2Q01362 244 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 PDK3Q15120 406 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 AGKQ53H12 422 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 REP15Q6BDI9 236 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 TXNDC11Q6PKC3 985 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 ZNF783Q6ZMS7 281 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 RNF19BQ6ZMZ0 732 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 GK5Q6ZS86 529 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 BADQ92934 168 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 PTERQ96BW5 349 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 NPAS2Q99743 824 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 DDX50Q9BQ39 737 aaKnown RBP12.88□□□□□ -0.35
SHMT2-205ENST00000553474 TTPALQ9BTX7 342 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 EFHD1Q9BUP0 239 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 EPB41L1Q9H4G0 881 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 PLK2Q9NYY3 685 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 ADA2Q9NZK5 511 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 CCDC167Q9P0B6 97 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 NDUFAF1Q9Y375 327 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 ARL5AQ9Y689 179 aa12.88□□□□□ -0.35
SHMT2-205ENST00000553474 PDE4DIPQ5VU43 2346 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 STX16-NPEPL1H3BU86 382 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 UBFD1O14562 309 aaKnown RBP12.87□□□□□ -0.35
SHMT2-205ENST00000553474 ENPP3O14638 875 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 STX16O14662 325 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 MRASO14807 208 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 AZIN1O14977 448 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 MUSKO15146 869 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 SRP72O76094 671 aaKnown RBP12.87□□□□□ -0.35
SHMT2-205ENST00000553474 MATN4O95460 622 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 HMBSP08397 361 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 MTHFD2P13995 350 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 CR2P20023 1033 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 TTPAP49638 278 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 PLK1P53350 603 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 ADARP55265 1226 aaKnown RBP12.87□□□□□ -0.35
SHMT2-205ENST00000553474 OXCT1P55809 520 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 TIAL1Q01085 375 aaKnown RBP eCLIP12.87□□□□□ -0.357e-9■■□□□ 13.1
SHMT2-205ENST00000553474 RAD51Q06609 339 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 LCP2Q13094 533 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 PABPC1LQ4VXU2 614 aaKnown RBP12.87□□□□□ -0.35
SHMT2-205ENST00000553474 KANK2Q63ZY3 851 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 IL31Q6EBC2 164 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 CHCHD4Q8N4Q1 142 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 OR52K2Q8NGK3 314 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 HMGCLL1Q8TB92 370 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 ZFAND2BQ8WV99 257 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 MARK4Q96L34 752 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 C19orf43Q9BQ61 176 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 NUSAP1Q9BXS6 441 aaKnown RBP12.87□□□□□ -0.35
SHMT2-205ENST00000553474 ADGRE3Q9BY15 652 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 CCSER2Q9H7U1 834 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 TMEM181Q9P2C4 612 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 CD300AQ9UGN4 299 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 SLC27A5Q9Y2P5 690 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 KCTD3Q9Y597 815 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 DNAJC15Q9Y5T4 150 aa12.87□□□□□ -0.35
SHMT2-205ENST00000553474 A0A1B0GVM2 712 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms