RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
SNRPF-205ENST00000553192 OGFRQ9NZT2 677 aa11.68□□□□□ -0.54
SNRPF-205ENST00000553192 C5AR2Q9P296 337 aa11.68□□□□□ -0.54
SNRPF-205ENST00000553192 USP25Q9UHP3 1055 aa11.68□□□□□ -0.54
SNRPF-205ENST00000553192 DNAI1Q9UI46 699 aa11.68□□□□□ -0.54
SNRPF-205ENST00000553192 NEU3Q9UQ49 428 aa11.68□□□□□ -0.54
SNRPF-205ENST00000553192 FARSAQ9Y285 508 aaKnown RBP11.68□□□□□ -0.54
SNRPF-205ENST00000553192 RASA4BC9J798 803 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 RASA4O43374 803 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 BUB1O43683 1085 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 FAM155BO75949 473 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 LETM1O95202 739 aaPredicted RBP11.67□□□□□ -0.54
SNRPF-205ENST00000553192 ERCC5P28715 1186 aaPredicted RBP11.67□□□□□ -0.54
SNRPF-205ENST00000553192 SULT1E1P49888 294 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 EPHA4P54764 986 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 CDK3Q00526 305 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 DEUP1Q05D60 604 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 PEX6Q13608 980 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 CYTH1Q15438 398 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 MANEALQ5VSG8 457 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 RESP18Q5W5W9 173 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 BRAT1Q6PJG6 821 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 BNC2Q6ZN30 1099 aaPredicted RBP11.67□□□□□ -0.54
SNRPF-205ENST00000553192 C11orf57Q6ZUT1 292 aaPredicted RBP11.67□□□□□ -0.54
SNRPF-205ENST00000553192 CUZD1Q86UP6 607 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 CEP57L1Q8IYX8 460 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 NXPE1Q8N323 547 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 COQ10AQ96MF6 247 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 OR2M4Q96R27 311 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 ILKAPQ9H0C8 392 aaPredicted RBP11.67□□□□□ -0.54
SNRPF-205ENST00000553192 MAGEH1Q9H213 219 aa11.67□□□□□ -0.54
SNRPF-205ENST00000553192 PHPT1Q9NRX4 125 aaPredicted RBP11.67□□□□□ -0.54
SNRPF-205ENST00000553192 A8MX80 341 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 CETN3O15182 167 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 YEATS4O95619 227 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 ELFN1P0C7U0 828 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 CD99P14209 185 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 CD1EP15812 388 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 CAPN3P20807 821 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 HTR1EP28566 365 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 SSTR2P30874 369 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 GLRBP48167 497 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 MAPKAPK2P49137 400 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 FMO5P49326 533 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 RPS15P62841 145 aaKnown RBP11.66□□□□□ -0.54
SNRPF-205ENST00000553192 SLC6A3Q01959 620 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 GCNT1Q02742 428 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 PYCR3Q53H96 274 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 INO80DQ53TQ3 878 aaPredicted RBP11.66□□□□□ -0.54
SNRPF-205ENST00000553192 ACBD5Q5T8D3 534 aaPredicted RBP11.66□□□□□ -0.54
SNRPF-205ENST00000553192 VWA5B1Q5TIE3 1220 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 FAM69BQ5VUD6 431 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 PWWP2BQ6NUJ5 590 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 Q6ZS92 163 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 BNIPLQ7Z465 357 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 PPP1R3BQ86XI6 285 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 PLXDC1Q8IUK5 500 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 ZNF641Q96N77 438 aaPredicted RBP11.66□□□□□ -0.54
SNRPF-205ENST00000553192 MAGEB5Q9BZ81 275 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 NOL6Q9H6R4 1146 aaKnown RBP11.66□□□□□ -0.54
SNRPF-205ENST00000553192 HPCAL4Q9UM19 191 aa11.66□□□□□ -0.54
SNRPF-205ENST00000553192 G3BP2Q9UN86 482 aaKnown RBP11.66□□□□□ -0.54
SNRPF-205ENST00000553192 PCYT1BQ9Y5K3 369 aaPredicted RBP11.66□□□□□ -0.54
SNRPF-205ENST00000553192 ACANP16112 2415 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 A0A1B0GUH1 482 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 THAP12O43422 761 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 MED7O43513 233 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 KIF1CO43896 1103 aaKnown RBP11.65□□□□□ -0.54
SNRPF-205ENST00000553192 RAMP2O60895 175 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 F9P00740 461 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 DRD2P14416 443 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 CA5AP35218 305 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 ZNF235Q14590 738 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 PTPN20Q4JDL3 420 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 TRNP1Q6NT89 227 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 IYDQ6PHW0 289 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 DOK6Q6PKX4 331 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 DPPA4Q7L190 304 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 TMEM102Q8N9M5 508 aaPredicted RBP11.65□□□□□ -0.54
SNRPF-205ENST00000553192 FNIP1Q8TF40 1166 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 CASKIN2Q8WXE0 1202 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 RELTQ969Z4 430 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 ECHDC3Q96DC8 303 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 NUS1Q96E22 293 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 NCAPGQ9BPX3 1015 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 CHST11Q9NPF2 352 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 AGPAT4Q9NRZ5 378 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 TMEM248Q9NWD8 314 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNRPF-205ENST00000553192 PCDHA7Q9UN72 937 aa11.65□□□□□ -0.54
SNRPF-205ENST00000553192 PPP1R3GB7ZBB8 358 aa11.64□□□□□ -0.55
SNRPF-205ENST00000553192 BHMG1C9JSJ3 638 aaPredicted RBP11.64□□□□□ -0.55
SNRPF-205ENST00000553192 FAM72CH0Y354 149 aa11.64□□□□□ -0.55
SNRPF-205ENST00000553192 PMM2O15305 246 aa11.64□□□□□ -0.55
SNRPF-205ENST00000553192 TOX3O15405 576 aaPredicted RBP11.64□□□□□ -0.55
SNRPF-205ENST00000553192 EDN3P14138 238 aa11.64□□□□□ -0.55
SNRPF-205ENST00000553192 RHOQP17081 205 aa11.64□□□□□ -0.55
SNRPF-205ENST00000553192 RGRP47804 291 aa11.64□□□□□ -0.55
SNRPF-205ENST00000553192 CUL4AQ13619 759 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms