RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 FSTL5Q8N475 847 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 OR56A4Q8NGH8 313 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 OR4C6Q8NH72 309 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 C1orf54Q8WWF1 131 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 TSACCQ96A04 125 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 TBATAQ96M53 351 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 DUSP23Q9BVJ7 150 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 RIOK2Q9BVS4 552 aaKnown RBP18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 FAM83DQ9H4H8 585 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 TRABDQ9H4I3 376 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 EVA1BQ9NVM1 165 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 KLF15Q9UIH9 416 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 DOLKQ9UPQ8 538 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 CSNK1G3Q9Y6M4 447 aa18.42■□□□□ 0.54
PRPF40B-216ENST00000552301 TNFRSF10CO14798 259 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 SCAMP1O15126 338 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 GCATO75600 419 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 TNFP01375 233 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 IFNB1P01574 187 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 ANXA6P08133 673 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 ATXN1LP0C7T5 689 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 FTH1P19P0C7X4 201 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 STIP1P31948 543 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 CXCR5P32302 372 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 CHRNA4P43681 627 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 DAB2P98082 770 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 SNX1Q13596 522 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 ELOCQ15369 112 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 CDKN3Q16667 212 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 LONRF2Q1L5Z9 754 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 PARP6Q2NL67 630 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 CCDC157Q569K6 752 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 ALS2CLQ60I27 953 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 ADAMTSL4Q6UY14 1074 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 NLRP8Q86W28 1048 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 SLC35F6Q8N357 371 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 CCDC89Q8N998 374 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 BLOC1S5Q8TDH9 187 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 PDXPQ96GD0 296 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 LRRC61Q9BV99 259 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 TEX101Q9BY14 249 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 CDH19Q9H159 772 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 TCEAL2Q9H3H9 227 aaPredicted RBP18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 FGF22Q9HCT0 170 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 NLGN3Q9NZ94 848 aa18.41■□□□□ 0.54
PRPF40B-216ENST00000552301 COL5A1P20908 1838 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 GOLGA4Q13439 2230 aaKnown RBP18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 ARID1BQ8NFD5 2236 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 TMEM202A6NGA9 273 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 SIGLEC6O43699 453 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 TRIM16O95361 564 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 GDF10P55107 478 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 FOXC1Q12948 553 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 C1orf61Q13536 156 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 DOK6Q6PKX4 331 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 GLT6D1Q7Z4J2 308 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 SCG3Q8WXD2 468 aaKnown RBP18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 OR1E3Q8WZA6 343 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 LGR4Q9BXB1 951 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 SPATA16Q9BXB7 569 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 SUDS3Q9H7L9 328 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 CAAP1Q9H8G2 361 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 CYP4F12Q9HCS2 524 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 ZKSCAN5Q9Y2L8 839 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 SPO11Q9Y5K1 396 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 DGKBQ9Y6T7 804 aa18.4■□□□□ 0.54
PRPF40B-216ENST00000552301 NCOR2Q9Y618 2525 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 PRSS38A1L453 326 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 TRIM38O00635 465 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 INPP4BO15327 924 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 AGTP01019 485 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 TCEA2Q15560 299 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 OASLQ15646 514 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 CCNG2Q16589 344 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 DEFB133Q30KQ1 61 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 TMC3Q7Z5M5 1100 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 HIC2Q96JB3 615 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 PBKQ96KB5 322 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 TBL1YQ9BQ87 522 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 APOL2Q9BQE5 337 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 GORASP1Q9BQQ3 440 aa18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 CARS2Q9HA77 564 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-216ENST00000552301 LMO7DNF2Z398 122 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 PSMD3O43242 534 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 ASMTLO95671 621 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 SOD1P00441 154 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 DCDC1P59894 354 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 HENMT1Q5T8I9 393 aaKnown RBP18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 ZDHHC20Q5W0Z9 365 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 ZCCHC8Q6NZY4 707 aaKnown RBP18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 GKN2Q86XP6 184 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 TAB3Q8N5C8 712 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 GLMNQ92990 594 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 RTP4Q96DX8 246 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 NAP1L3Q99457 506 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 AGAP2Q99490 1192 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 ZSCAN5AQ9BUG6 496 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 FRMD8Q9BZ67 464 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 LRRC40Q9H9A6 602 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 MRPL40Q9NQ50 206 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms