RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CNDP1Q96KN2 507 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 ATOH8Q96SQ7 321 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 OSBPL1AQ9BXW6 950 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 SHCBP1LQ9BZQ2 653 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 GSTO2Q9H4Y5 243 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 ALG9Q9H6U8 611 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 MAGEE1Q9HCI5 957 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 CD248Q9HCU0 757 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 BPIFA1Q9NP55 256 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 PRKAG2Q9UGJ0 569 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 IKZF3Q9UKT9 509 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 RPL26L1Q9UNX3 145 aaKnown RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 PLA2G4CQ9UP65 541 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 LRRK1Q38SD2 2015 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 A0A0J9YYE9 177 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 CXorf51AA0A1B0GTR3 108 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 MEI4A8MW99 385 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 B2RBV5 119 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 TMEM233B4DJY2 109 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 E9PBE3 544 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 C5orf67F2Z3F1 127 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 SLCO1B7G3V0H7 640 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 GYG2O15488 501 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 KLHL41O60662 606 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 CLASP2O75122 1294 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 PEX11AO75192 247 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 NIPSNAP2O75323 286 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 SRP72O76094 671 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 SNUPNO95149 360 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 FGF19O95750 216 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 PENKP01210 267 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 TRBC1P01850 177 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 CYBBP04839 570 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 RHOP08100 348 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 PKMP14618 531 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 EN2P19622 333 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 HLA-FP30511 346 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 HOXA9P31269 272 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 GKP32189 559 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 MAPK8P45983 427 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 STK19P49842 368 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 EPHB1P54762 984 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 RPL26P61254 145 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 NTHL1P78549 312 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 UBE3AQ05086 875 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 BCL2L1Q07817 233 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 NAA25Q14CX7 972 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 OR4D1Q15615 310 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 ZNF77Q15935 545 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 UNC50Q53HI1 259 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 ARHGAP15Q53QZ3 475 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 PRSS36Q5K4E3 855 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 WASHC2DQ5SRD0 308 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 C22orf39Q6P5X5 142 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 RPS27LQ71UM5 84 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 RTL10Q7L3V2 364 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 ZSWIM9Q86XI8 627 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 C7orf61Q8IZ16 206 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 PHOSPHO2Q8TCD6 241 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 MAGEC3Q8TD91 643 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 L3HYPDHQ96EM0 354 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 BIRC8Q96P09 236 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 CCDC28BQ9BUN5 200 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 GPR63Q9BZJ6 419 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 TNKS2Q9H2K2 1166 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 TFB2MQ9H5Q4 396 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 ZNF385DQ9H6B1 395 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 TNFRSF12AQ9NP84 129 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 TCF7L2Q9NQB0 619 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 VTI1BQ9UEU0 232 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 RWDD3Q9Y3V2 267 aa11.47□□□□□ -0.57
RAB5C-208ENST00000551338 OAS3Q9Y6K5 1087 aaKnown RBP11.47□□□□□ -0.57
RAB5C-208ENST00000551338 CAPN8A6NHC0 703 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 SDHDO14521 159 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 NEMP1O14524 444 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 GAPDHSO14556 408 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-208ENST00000551338 CHUKO15111 745 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 GRM6O15303 877 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 GPR39O43194 453 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 MTHFD2P13995 350 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 HNRNPLP14866 589 aaKnown RBP eCLIP11.46□□□□□ -0.57
RAB5C-208ENST00000551338 GM2AP17900 193 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 CD9P21926 228 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 PRDX6P30041 224 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 CA5AP35218 305 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 TTPAP49638 278 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 KDSRQ06136 332 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 KLF10Q13118 480 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 PDCD2Q16342 344 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-208ENST00000551338 CDKN3Q16667 212 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 PTPRNQ16849 979 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 LSM12Q3MHD2 195 aaKnown RBP11.46□□□□□ -0.57
RAB5C-208ENST00000551338 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 SH2D4BQ5SQS7 431 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 ZNF678Q5SXM1 525 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms