RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CYP4V2Q6ZWL3 525 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 MON1BQ7L1V2 547 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 STRADAQ7RTN6 431 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 GKN2Q86XP6 184 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 SLITRK4Q8IW52 837 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ARHGAP12Q8IWW6 846 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 PGBD5Q8N414 524 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 LSM14AQ8ND56 463 aaKnown RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 DENND6BQ8NEG7 585 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 OR56A4Q8NGH8 313 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ASB12Q8WXK4 309 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 NANOS1Q8WY41 292 aaKnown RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 SGF29Q96ES7 293 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 LIN37Q96GY3 246 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 BTBD6Q96KE9 485 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 FAM81BQ96LP2 452 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 CCDC74BQ96LY2 380 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 WDR92Q96MX6 357 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 AGAP2Q99490 1192 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 OSBPL1AQ9BXW6 950 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 CARS2Q9HA77 564 aaKnown RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 USP29Q9HBJ7 922 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ZNF71Q9NQZ8 489 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 OCIAD1Q9NX40 245 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 B4GALT6Q9UBX8 382 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 IL17BQ9UHF5 180 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 DCTN4Q9UJW0 460 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ATP8A1Q9Y2Q0 1164 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 HEMK1Q9Y5R4 338 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 USP9YO00507 2555 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 SPTAN1Q13813 2472 aaKnown RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 NOTCH2Q04721 2471 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 IGHV5-10-1A0A0J9YXX1 117 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 PRSS38A1L453 326 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 SIGLEC16A6NMB1 481 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 K7EM74 188 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 EEF2KO00418 725 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 PPM1DO15297 605 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 INPP4BO15327 924 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 NKX2-8O15522 239 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 PALMO75781 387 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 PDGFAP04085 211 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ELFN1P0C7U0 828 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ATP1A3P13637 1013 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 LIFP15018 202 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ERCC2P18074 760 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 LHCGRP22888 699 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 AMPD1P23109 780 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 CSF2RBP32927 897 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 MAPK9P45984 424 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ZNF143P52747 638 aaPredicted RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 COPB1P53618 953 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 NRG1Q02297 640 aaPredicted RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 TNP2Q05952 138 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 RAD51Q06609 339 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ZFP36L1Q07352 338 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 TRAF2Q12933 501 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ARHGEF7Q14155 803 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 HLTFQ14527 1009 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 CNGA3Q16281 694 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 SMTNL2Q2TAL5 461 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 C14orf28Q4W4Y0 310 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 CERCAMQ5T4B2 595 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 CFAP58Q5T655 872 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 CDKAL1Q5VV42 579 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 Q6ZVL8 140 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 HEATR4Q86WZ0 1026 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 PHF13Q86YI8 300 aaPredicted RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 FAM114A1Q8IWE2 563 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 MCOLN2Q8IZK6 566 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 FSTL5Q8N475 847 aaPredicted RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 MSANTD4Q8NCY6 345 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 SNRNP27Q8WVK2 155 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 NAT6Q93015 286 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ART4Q93070 314 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 SCAMP4Q969E2 229 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ZNF653Q96CK0 615 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 AGPAT1Q99943 283 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 FUCA2Q9BTY2 467 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 SNRNP25Q9BV90 132 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 STRADBQ9C0K7 418 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 NUP62CLQ9H1M0 184 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 ABCG8Q9H221 673 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 APMAPQ9HDC9 416 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 TAAR2Q9P1P5 351 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 MYO1AQ9UBC5 1043 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 DKK3Q9UBP4 350 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 KLHL3Q9UH77 587 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 SUFUQ9UMX1 484 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 B3GALT1Q9Y5Z6 326 aa6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 MRPS18BQ9Y676 258 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-214ENST00000551320 TSPAN11A1L157 253 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 NPIPB15A6NHN6 443 aaPredicted RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 CACNB4O00305 520 aaPredicted RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 TRAFD1O14545 582 aaPredicted RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 TERTO14746 1132 aaKnown RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 DAPK3O43293 454 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms