RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
TROAP-213ENST00000550709 ASCC3Q8N3C0 2202 aaKnown RBP13.7□□□□□ -0.22
TROAP-213ENST00000550709 PLXNA2O75051 1894 aa13.7□□□□□ -0.22
TROAP-213ENST00000550709 DNAH14Q0VDD8 3507 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 H3BM21 787 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 PGRMC1O00264 195 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 INPP4BO15327 924 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 PIAS2O75928 621 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 FGF1P05230 155 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 NME1P15531 152 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 TSHRP16473 764 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 KIAA1024LP59773 190 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 ALG11Q2TAA5 492 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 P3H1Q32P28 736 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 INAVAQ3KP66 663 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 PRRT3Q5FWE3 981 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 DOK6Q6PKX4 331 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 RANBP10Q6VN20 620 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 DBX2Q6ZNG2 339 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 ZNF765Q7L2R6 523 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 GLT6D1Q7Z4J2 308 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 TMC3Q7Z5M5 1100 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 TRIM74Q86UV6 250 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 SLC25A45Q8N413 288 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 GPR26Q8NDV2 337 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 ATL2Q8NHH9 583 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 OR1E3Q8WZA6 343 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 MAGOHBQ96A72 148 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 PPP1R2P1Q96PQ5 205 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 SLC13A1Q9BZW2 595 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 ETNK1Q9HBU6 452 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 MRPL40Q9NQ50 206 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 PIH1D1Q9NWS0 290 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 APOBEC3BQ9UH17 382 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 DRG1Q9Y295 367 aaKnown RBP13.69□□□□□ -0.22
TROAP-213ENST00000550709 ZKSCAN5Q9Y2L8 839 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 TMEM98Q9Y2Y6 226 aa13.69□□□□□ -0.22
TROAP-213ENST00000550709 ADAMTS9Q9P2N4 1935 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 E7EVH7 732 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 CBFA2T3O75081 653 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 SOD1P00441 154 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 MYCLP1P12525 358 aaPredicted RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 CEACAM1P13688 526 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 BPIP17213 487 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 TPH1P17752 444 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 RPL22P35268 128 aaKnown RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 POLD2P49005 469 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 LMAN1P49257 510 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 SIM1P81133 766 aaPredicted RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 CDK3Q00526 305 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 DPTQ07507 201 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 PTPRCAPQ14761 206 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 TRIP6Q15654 476 aaKnown RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 CCDC157Q569K6 752 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 DRICH1Q6PGQ1 229 aaPredicted RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 ADAMTSL4Q6UY14 1074 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 KANSL1Q7Z3B3 1105 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 TTC30BQ8N4P2 665 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 ZNF548Q8NEK5 533 aaPredicted RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 OR56A4Q8NGH8 313 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 LRRC45Q96CN5 670 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 PDXPQ96GD0 296 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 CAPZA3Q96KX2 299 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 SRPK1Q96SB4 655 aaKnown RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 NAPGQ99747 312 aaPredicted RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 SPATA16Q9BXB7 569 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 TEX101Q9BY14 249 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 LRRC40Q9H9A6 602 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 FGF22Q9HCT0 170 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 RAB6BQ9NRW1 208 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 HOMER3Q9NSC5 361 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 TTC7AQ9ULT0 858 aaPredicted RBP13.68□□□□□ -0.22
TROAP-213ENST00000550709 ARL5AQ9Y689 179 aa13.68□□□□□ -0.22
TROAP-213ENST00000550709 CTAGE9A4FU28 777 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 RGSL1A5PLK6 1076 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 PDE2AO00408 941 aaPredicted RBP13.67□□□□□ -0.22
TROAP-213ENST00000550709 TRIM38O00635 465 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 AQP9O43315 295 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 RASGRP1O95267 797 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 AP2A1O95782 977 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 CELA2BP08218 269 aaPredicted RBP13.67□□□□□ -0.22
TROAP-213ENST00000550709 HOXC4P09017 264 aaPredicted RBP13.67□□□□□ -0.22
TROAP-213ENST00000550709 CTSEP14091 401 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 KELP23276 732 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 HK3P52790 923 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 TERF1P54274 439 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 TRIP13Q15645 432 aaPredicted RBP13.67□□□□□ -0.22
TROAP-213ENST00000550709 DEFB133Q30KQ1 61 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 KCTD11Q693B1 232 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 DENND5AQ6IQ26 1287 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 MARK2Q7KZI7 788 aaKnown RBP13.67□□□□□ -0.22
TROAP-213ENST00000550709 ACTRT1Q8TDG2 376 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 PTCD2Q8WV60 388 aaKnown RBP13.67□□□□□ -0.22
TROAP-213ENST00000550709 BTN2A2Q8WVV5 523 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 HIC2Q96JB3 615 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 CDC6Q99741 560 aa13.67□□□□□ -0.22
TROAP-213ENST00000550709 TRABDQ9H4I3 376 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms