RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 BACE2Q9Y5Z0 518 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 MYH10P35580 1976 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 C2CD4BA6NLJ0 364 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 RGS14O43566 566 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 PRMT3O60678 531 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 USP1O94782 785 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 KLF8O95600 359 aaPredicted RBP12.18□□□□□ -0.46
NR4A1-215ENST00000550557 TCN1P20061 433 aaPredicted RBP12.18□□□□□ -0.46
NR4A1-215ENST00000550557 FLOT2Q14254 428 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 XKR6Q5GH73 641 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 BBS7Q8IWZ6 715 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 ACE2Q9BYF1 805 aaPredicted RBP12.18□□□□□ -0.46
NR4A1-215ENST00000550557 ZNF576Q9H609 170 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 CARS2Q9HA77 564 aaKnown RBP12.18□□□□□ -0.46
NR4A1-215ENST00000550557 IL36AQ9UHA7 158 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 GJD2Q9UKL4 321 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 LRCH1Q9Y2L9 728 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 ILVBLA1L0T0 632 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 GPD2P43304 727 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 PDK4Q16654 411 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 LRRC73Q5JTD7 316 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 FBXL22Q6P050 247 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 LMO3Q8TAP4 145 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 HERC2P3Q9BVR0 1158 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 ADAM7Q9H2U9 754 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 SIRPGQ9P1W8 387 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 SUSD2Q9UGT4 822 aa12.18□□□□□ -0.46
NR4A1-215ENST00000550557 FCHO1O14526 889 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 MGRN1O60291 552 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 PRAMEF1O95521 474 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 CNPP09543 421 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 TSHRP16473 764 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SERPINB3P29508 390 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 HPCAL1P37235 193 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SYPL2Q5VXT5 272 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SLC39A4Q6P5W5 647 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 IL27RAQ6UWB1 636 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 GDPD4Q6W3E5 623 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SMG8Q8ND04 991 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 ZNF516Q92618 1163 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 MTFMTQ96DP5 389 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SH3GL1Q99961 368 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SUV39H2Q9H5I1 410 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 C8orf33Q9H7E9 229 aaPredicted RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SEMA4BQ9NPR2 832 aaPredicted RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 PIAS3Q9Y6X2 628 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 GOLGA4Q13439 2230 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 RBM47A0AV96 593 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 UBXN8O00124 270 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 RPP40O75818 363 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 CTBP1Q13363 440 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 RFTN1Q14699 578 aaPredicted RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 TRMT5Q32P41 509 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 ZC3H14Q6PJT7 736 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 Q6ZVU0 165 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 FAM46DQ8NEK8 389 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 ASB2Q96Q27 587 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 WBP1LQ9NX94 342 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 CCDC189A1A4V9 331 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 GRXCR1A8MXD5 290 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 WFS1O76024 890 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 ALDH4A1P30038 563 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 RANBP1P43487 201 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SLC16A1P53985 500 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 NFYCQ13952 458 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 CAPN13Q6MZZ7 669 aaPredicted RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 IZUMO2Q6UXV1 221 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 UBE2R2Q712K3 238 aaPredicted RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 TMPRSS6Q8IU80 811 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 MIER2Q8N344 545 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 PCDH20Q8N6Y1 951 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 STARD8Q92502 1023 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 ZDHHC18Q9NUE0 388 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 IL1RAPL1Q9NZN1 696 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 V9GYQ6 96 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 NHSQ6T4R5 1651 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 WNT9AO14904 365 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 ALOX15BO15296 676 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 MAGEA10P43363 369 aaPredicted RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 PRKAA2P54646 552 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 ADRM1Q16186 407 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 RTP2Q5QGT7 225 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 LRRC74BQ6ZQY2 392 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SLC41A1Q8IVJ1 513 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 OVCA2Q8WZ82 227 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 LINGO1Q96FE5 620 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 DACH2Q96NX9 599 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 TBC1D10AQ9BXI6 508 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 TRIT1Q9H3H1 467 aaKnown RBP12.17□□□□□ -0.46
NR4A1-215ENST00000550557 PTPRHQ9HD43 1115 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 TMCC3Q9ULS5 477 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 SLC12A4Q9UP95 1085 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 PCDHB1Q9Y5F3 818 aa12.17□□□□□ -0.46
NR4A1-215ENST00000550557 PIRO00625 290 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 ZCCHC18P0CG32 403 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TFEBP19484 476 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PRKAG1P54619 331 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PLOD1Q02809 727 aaPredicted RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 NOMO1Q15155 1222 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 750.9 ms