RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TEKT4Q8WW24 435 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 COL26A1Q96A83 441 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 AP2M1Q96CW1 435 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 CSPG4P5Q96PW8 444 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 OR2M4Q96R27 311 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 NUDT22Q9BRQ3 303 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 ASPSCR1Q9BZE9 553 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 KCNK4Q9NYG8 393 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 PPIL1Q9Y3C6 166 aa23■■□□□ 1.27
SMARCD1-209ENST00000550477 IGHV5-10-1A0A0J9YXX1 117 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 NPIPB15A6NHN6 443 aaPredicted RBP22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 DDX3XO00571 662 aaKnown RBP eCLIP22.99■■□□□ 1.273e-10■■■■□ 20.8
SMARCD1-209ENST00000550477 PPFIA2O75334 1257 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 CCL4P13236 92 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 CA4P22748 312 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 LHCGRP22888 699 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 TYRO3Q06418 890 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 SRSF6Q13247 344 aaKnown RBP22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 SQSTM1Q13501 440 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 LRP8Q14114 963 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 CCDC122Q5T0U0 273 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 NLRP8Q86W28 1048 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 NAGSQ8N159 534 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 RCBTB1Q8NDN9 531 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 CCDC74BQ96LY2 380 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 NSMCE3Q96MG7 304 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 MCCC1Q96RQ3 725 aaPredicted RBP22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 POLR1EQ9GZS1 481 aaKnown RBP22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 ISCUQ9H1K1 167 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 STN1Q9H668 368 aaKnown RBP22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 STARD5Q9NSY2 213 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 IP6K2Q9UHH9 426 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 PCDHGA3Q9Y5H0 932 aa22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 BZW2Q9Y6E2 419 aaKnown RBP22.99■■□□□ 1.27
SMARCD1-209ENST00000550477 SETXQ7Z333 2677 aaKnown RBP22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 PEX11BO96011 259 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 FUCA1P04066 466 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 RARAP10276 462 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 MAN1A1P33908 653 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 POLD2P49005 469 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 TBR1Q16650 682 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 HADHQ16836 314 aaKnown RBP22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 TIGD7Q6NT04 549 aaPredicted RBP22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 ADAMTSL4Q6UY14 1074 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 TECPR1Q7Z6L1 1165 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 RAVER1Q8IY67 606 aaKnown RBP22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 OR10G6Q8NH81 332 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 SLC38A3Q99624 504 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 NT5MQ9NPB1 228 aa22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 RCOR3Q9P2K3 495 aaPredicted RBP22.98■■□□□ 1.27
SMARCD1-209ENST00000550477 FAM87AP0C7U9 286 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 CTPS1P17812 591 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 IL1R2P27930 398 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 LRRC66Q68CR7 880 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 TMEM71Q6P5X7 295 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 ZNF574Q6ZN55 896 aaPredicted RBP22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 ZNF765Q7L2R6 523 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 GALNT13Q8IUC8 556 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 NRSN1Q8IZ57 195 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 EXD1Q8NHP7 514 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 PIH1D2Q8WWB5 315 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 SCARF2Q96GP6 870 aaPredicted RBP22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 BPIFA3Q9BQP9 254 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 DDA1Q9BW61 102 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 ETNK2Q9NVF9 386 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 SLC39A1Q9NY26 324 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 IL17BQ9UHF5 180 aa22.97■■□□□ 1.27
SMARCD1-209ENST00000550477 ASH1LQ9NR48 2969 aaKnown RBP22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 IGHV1OR21-1A0A087WYE8 117 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 PPM1DO15297 605 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 CAPN5O15484 640 aaPredicted RBP22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 ASMTLO95671 621 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 FGF3P11487 239 aaPredicted RBP22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 SSR1P43307 286 aaKnown RBP22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 NOP2P46087 812 aaKnown RBP22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 RAB15P59190 212 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 ANO6Q4KMQ2 910 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 TDRD12Q587J7 1177 aaKnown RBP22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 DCAF12Q5T6F0 453 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 TSPAN33Q86UF1 283 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 JPH3Q8WXH2 748 aaPredicted RBP22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 SH3KBP1Q96B97 665 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 TEFMQ96QE5 360 aaKnown RBP22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 ABCG8Q9H221 673 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 ADNPQ9H2P0 1102 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 CD84Q9UIB8 345 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 TMEM98Q9Y2Y6 226 aa22.96■■□□□ 1.27
SMARCD1-209ENST00000550477 DUX1O43812 170 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 SKILP12757 684 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 SLC2A4P14672 509 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 PYCR3Q53H96 274 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 NKAIN2Q5VXU1 208 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 TEX26Q8N6G2 289 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 PATE1Q8WXA2 126 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 ART4Q93070 314 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 NKD1Q969G9 470 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 SLC25A18Q9H1K4 315 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 PCDH18Q9HCL0 1135 aa22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 GEMIN8Q9NWZ8 242 aaKnown RBP22.95■■□□□ 1.26
SMARCD1-209ENST00000550477 AMACRQ9UHK6 382 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms