RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283		A0A1W2PQ67	120 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	C5orf60	A6NFR6	353 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	GAPDHS	O14556	408 aa	Predicted RBP	11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	ZNF185	O15231	689 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	SIGLEC6	O43699	453 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	NRDC	O43847	1150 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	CEP104	O60308	925 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	FGG	P02679	453 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	ITGAV	P06756	1048 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	CEACAM1	P13688	526 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	SPINT3	P49223	89 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	RPL26	P61254	145 aa	Known RBP	11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	SIM1	P81133	766 aa	Predicted RBP	11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	MTM1	Q13496	603 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	SLC1A5	Q15758	541 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	SLC14A2	Q15849	920 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	KHDC1	Q4VXA5	237 aa	Known RBP	11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	SEL1L2	Q5TEA6	688 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	KCTD11	Q693B1	232 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	TTC27	Q6P3X3	843 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	ENPP7	Q6UWV6	458 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	MACC1	Q6ZN28	852 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	RD3	Q7Z3Z2	195 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	TMC3	Q7Z5M5	1100 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	PARG	Q86W56	976 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	PHACTR4	Q8IZ21	702 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	PRELID2	Q8N945	189 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	CCDC97	Q96F63	343 aa	Predicted RBP	11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	TEX101	Q9BY14	249 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	BPIFA1	Q9NP55	256 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	TRHDE	Q9UKU6	1024 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	RPL26L1	Q9UNX3	145 aa	Known RBP	11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	TMEM98	Q9Y2Y6	226 aa		11.18	□□□□□ -0.62
RAB5B-208	ENST00000550283	GOLGA6C	A6NDK9	693 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	GOLGA6B	A6NDN3	693 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	PSMD11	O00231	422 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	INPP4B	O15327	924 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	FLRT2	O43155	660 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	MTSS1	O43312	755 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	CEACAM5	P06731	702 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	GOLGA6D	P0CG33	693 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	HOXB3	P14651	431 aa	Predicted RBP	11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	TSHR	P16473	764 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	BPI	P17213	487 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	JUND	P17535	347 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	SDHB	P21912	280 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	GRIA1	P42261	906 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	YPEL5	P62699	121 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	CDK3	Q00526	305 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	ARHGEF7	Q14155	803 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	TRIP6	Q15654	476 aa	Known RBP	11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	DEFB133	Q30KQ1	61 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	PROX2	Q3B8N5	592 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	HENMT1	Q5T8I9	393 aa	Known RBP	11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	ALS2CL	Q60I27	953 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	RAET1G	Q6H3X3	334 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	RANBP10	Q6VN20	620 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	HID1	Q8IV36	788 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	LMX1A	Q8TE12	382 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	NAT14	Q8WUY8	206 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	SKA1	Q96BD8	255 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	AP2M1	Q96CW1	435 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	RTP4	Q96DX8	246 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	IFT43	Q96FT9	208 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	ALS2CR12	Q96Q35	445 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	VAT1	Q99536	393 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	C1QTNF7	Q9BXJ2	289 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	GOLGA6A	Q9NYA3	693 aa		11.17	□□□□□ -0.62
RAB5B-208	ENST00000550283	CCL22	O00626	93 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	DKK1	O94907	266 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	ADRB1	P08588	477 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	FTH1P19	P0C7X4	201 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	ZNF30	P17039	623 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	TPH1	P17752	444 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	PML	P29590	882 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	CETN2	P41208	172 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	GRK6	P43250	576 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	ARRB1	P49407	418 aa	Predicted RBP	11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	HK3	P52790	923 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	THOP1	P52888	689 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	KIAA1024L	P59773	190 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	SRP54	P61011	504 aa	Known RBP	11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	DPT	Q07507	201 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	MPP3	Q13368	585 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	PRRT3	Q5FWE3	981 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	DOK6	Q6PKX4	331 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	NRROS	Q86YC3	692 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	RASGEF1C	Q8N431	466 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	CHCHD4	Q8N4Q1	142 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	TTC13	Q8NBP0	860 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	COX14	Q96I36	57 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	CNDP2	Q96KP4	475 aa	Known RBP	11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	WDR92	Q96MX6	357 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	AP1M1	Q9BXS5	423 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	ADGRE3	Q9BY15	652 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	TMEM168	Q9H0V1	697 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	WDR26	Q9H7D7	661 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms