RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PAF1Q8N7H5 531 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 TTC13Q8NBP0 860 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 NUDCD1Q96RS6 583 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 ZPBPQ9BS86 351 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 DHX35Q9H5Z1 703 aaKnown RBP9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 SP110Q9HB58 689 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 FBXO8Q9NRD0 319 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 KCNK4Q9NYG8 393 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 AP4E1Q9UPM8 1137 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 PCDHGC4Q9Y5F7 938 aa9.82□□□□□ -0.84
TRAFD1-207ENST00000550051 LRRC10BA6NIK2 292 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 EFCAB7A8K855 629 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 NKX2-8O15522 239 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 PEX11BO96011 259 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 CYP2A6P11509 494 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 CSF2RBP32927 897 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 ETV3P41162 512 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 POLD2P49005 469 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 ABHD18Q0P651 414 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 MAMLD1Q13495 774 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 KRT31Q15323 416 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 SYCP1Q15431 976 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 IGFBP7Q16270 282 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 CA9Q16790 459 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 PYCR3Q53H96 274 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 RALGPS1Q5JS13 557 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 ANKS6Q68DC2 871 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 ADAMTSL4Q6UY14 1074 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 ARHGAP36Q6ZRI8 547 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 NLGN4XQ8N0W4 816 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 NPWQ8N729 165 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 NLGN4YQ8NFZ3 816 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 C9orf43Q8TAL5 461 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 APOBEC4Q8WW27 367 aaKnown RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 RTP4Q96DX8 246 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 PSMG3-AS1Q96PY0 264 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 MCCC1Q96RQ3 725 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 TRIT1Q9H3H1 467 aaKnown RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 GPN2Q9H9Y4 310 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 PARVAQ9NVD7 372 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 GPATCH2LQ9NWQ4 482 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 TMEM9Q9P0T7 183 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 TMEM184BQ9Y519 407 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 RELNP78509 3460 aa9.81□□□□□ -0.84
TRAFD1-207ENST00000550051 TTC24A2A3L6 582 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 TMEM191CA6NGB0 347 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 DFFAO00273 331 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 RNF8O76064 485 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 SOD1P00441 154 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 TPM2P07951 284 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 LHCGRP22888 699 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 MPSTP25325 297 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 MAN1A1P33908 653 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 ACTR1BP42025 376 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 ACTR1AP61163 376 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 MC1RQ01726 317 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 LRP8Q14114 963 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 DPYSQ14117 519 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 NCAPHQ15003 741 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 PLEKHA7Q6IQ23 1121 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 PPP1R2P3Q6NXS1 205 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 CEACAM20Q6UY09 585 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 CYP4V2Q6ZWL3 525 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 TIPARPQ7Z3E1 657 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 IRF2BP2Q7Z5L9 587 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 FAM129CQ86XR2 697 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 RAVER1Q8IY67 606 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 PGBD5Q8N414 524 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 SFRP1Q8N474 314 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 NEK11Q8NG66 645 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 OR10G6Q8NH81 332 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 KIAA1143Q96AT1 154 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 ABHD17AQ96GS6 310 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 AHCYL2Q96HN2 611 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 OR2M4Q96R27 311 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 PEBP4Q96S96 227 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 KCTD15Q96SI1 283 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 SLC38A3Q99624 504 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 MGME1Q9BQP7 344 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 SNRNP25Q9BV90 132 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 ABCG8Q9H221 673 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 NOD2Q9HC29 1040 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 CWC15Q9P013 229 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 PCSK1NQ9UHG2 260 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 MAN2B2Q9Y2E5 1009 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 PLEKHM1Q9Y4G2 1056 aa9.8□□□□□ -0.84
TRAFD1-207ENST00000550051 LOC101059948A0A1B0GTJ6 334 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 NPIPB15A6NHN6 443 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 MAFKO60675 156 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 PGLSO95336 258 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 CPP00450 1065 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 PYGLP06737 847 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 CCDC172P0C7W6 258 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 ATP1A3P13637 1013 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 PSMA2P25787 234 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 MIPP30301 263 aa9.79□□□□□ -0.84
TRAFD1-207ENST00000550051 GPR1P46091 355 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms