RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CD84Q9UIB8 345 aa15.36■□□□□ 0.05
RAB5C-205ENST00000550013 PCDHGA3Q9Y5H0 932 aa15.36■□□□□ 0.05
RAB5C-205ENST00000550013 B3GALT1Q9Y5Z6 326 aa15.36■□□□□ 0.05
RAB5C-205ENST00000550013 LRRC53A6NM62 1247 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 ZW10O43264 779 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 MAFKO60675 156 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 PGLSO95336 258 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 FTLP02792 175 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-205ENST00000550013 THRAP10827 490 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 LIFP15018 202 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 TEAD1P28347 426 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 UGT1A3P35503 534 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 GPR1P46091 355 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 ZNF135P52742 658 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-205ENST00000550013 TRA2AQ13595 282 aaKnown RBP eCLIP15.35■□□□□ 0.05
RAB5C-205ENST00000550013 ASIC2Q16515 512 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 E4F1Q66K89 784 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-205ENST00000550013 TMCO3Q6UWJ1 677 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 ZNF571Q7Z3V5 609 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-205ENST00000550013 TECPR1Q7Z6L1 1165 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 ZNF761Q86XN6 746 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-205ENST00000550013 IL22RA1Q8N6P7 574 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 AGBL5Q8NDL9 886 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 OR4D9Q8NGE8 314 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 HSPH1Q92598 858 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 ZNF653Q96CK0 615 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 SCRN2Q96FV2 425 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 OR2M4Q96R27 311 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 MCCC1Q96RQ3 725 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-205ENST00000550013 SLC25A18Q9H1K4 315 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 ABCG8Q9H221 673 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 HAUS4Q9H6D7 363 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 OCIAD1Q9NX40 245 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 SLC39A1Q9NY26 324 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 KCNK4Q9NYG8 393 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 MYO1AQ9UBC5 1043 aa15.35■□□□□ 0.05
RAB5C-205ENST00000550013 NBASA2RRP1 2371 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 TRBV23OR9-2A0A075B6M9 112 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 PSMD11O00231 422 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 PDHA1P08559 390 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 CSTF2P33240 577 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAB5C-205ENST00000550013 ARL4AP40617 200 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 MMP13P45452 471 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 DPTQ07507 201 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 DPYSL2Q16555 572 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 STX1AQ16623 288 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 ARMC12Q5T9G4 340 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 BORAQ6PGQ7 559 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 SASS6Q6UVJ0 657 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 USP45Q70EL2 814 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 MARK2Q7KZI7 788 aaKnown RBP15.34■□□□□ 0.05
RAB5C-205ENST00000550013 POLNQ7Z5Q5 900 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 PTRH1Q86Y79 214 aaKnown RBP15.34■□□□□ 0.05
RAB5C-205ENST00000550013 ATPAF2Q8N5M1 289 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 PIH1D2Q8WWB5 315 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 SCAMP4Q969E2 229 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 SCARF2Q96GP6 870 aaPredicted RBP15.34■□□□□ 0.05
RAB5C-205ENST00000550013 CSPG4P5Q96PW8 444 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 CDH19Q9H159 772 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAB5C-205ENST00000550013 MYO6Q9UM54 1294 aa15.34■□□□□ 0.05
RAB5C-205ENST00000550013 EFCAB7A8K855 629 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 DDX3XO00571 662 aaKnown RBP eCLIP15.33■□□□□ 0.047e-9■■■□□ 17.5
RAB5C-205ENST00000550013 EML2O95834 649 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 NFKBIAP25963 317 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 PCK1P35558 622 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 TLE1Q04724 770 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 SQSTM1Q13501 440 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 PYCR3Q53H96 274 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 LRRC66Q68CR7 880 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 TXNRD3NBQ6F5E7 133 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 ADAMTSL4Q6UY14 1074 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 FAM129CQ86XR2 697 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 CACNA2D3Q8IZS8 1091 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 BBS5Q8N3I7 341 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 AOPEPQ8N6M6 819 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 CCDC112Q8NEF3 446 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 SLC37A2Q8TED4 501 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 AP2M1Q96CW1 435 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 AGAP2Q99490 1192 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 DDA1Q9BW61 102 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 ZMYND15Q9H091 742 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 NT5MQ9NPB1 228 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 PPIL1Q9Y3C6 166 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 SCINQ9Y6U3 715 aa15.33■□□□□ 0.04
RAB5C-205ENST00000550013 RAD1O60671 282 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 MAP3K6O95382 1288 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 RARAP10276 462 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 GZMAP12544 262 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 PPM1FP49593 454 aaPredicted RBP15.32■□□□□ 0.04
RAB5C-205ENST00000550013 POLE2P56282 527 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 KCNAB2Q13303 367 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 PEX6Q13608 980 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 RALGPS1Q5JS13 557 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 COLEC12Q5KU26 742 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 SNAP47Q5SQN1 464 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 MARC1Q5VT66 337 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 ANKS6Q68DC2 871 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 TMEM71Q6P5X7 295 aa15.32■□□□□ 0.04
RAB5C-205ENST00000550013 CLEC17AQ6ZS10 378 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms