RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ARL4CP56559 192 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 LBRQ14739 615 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 AARS2Q5JTZ9 985 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 KIAA1328Q86T90 577 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 SRLQ86TD4 932 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 NT5CQ8TCD5 201 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 ACTRT2Q8TDY3 377 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 IRF7Q92985 503 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 NACC2Q96BF6 587 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 HEXIM2Q96MH2 286 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 FERMT1Q9BQL6 677 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 NTMT1Q9BV86 223 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 OSBPL10Q9BXB5 764 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 RHOJQ9H4E5 214 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 UTP11Q9Y3A2 253 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 CCL27Q9Y4X3 112 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 TNPO3Q9Y5L0 923 aaKnown RBP4.89□□□□□ -1.63
SCAF11-212ENST00000549162 DUSP10Q9Y6W6 482 aa4.89□□□□□ -1.63
SCAF11-212ENST00000549162 VPS4BO75351 444 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TADA2AO75478 443 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 SUPT7LO94864 414 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 S1PR4O95977 384 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CYP17A1P05093 508 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ERCC2P18074 760 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 C5AR1P21730 350 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 AKAP5P24588 427 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ERVFC1P60507 584 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 PFN3P60673 137 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 IGLV3-21P80748 117 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 OCRLQ01968 901 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TEKQ02763 1124 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 MTM1Q13496 603 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TUBB3Q13509 450 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 SLC1A5Q15758 541 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 HNRNPA1L2Q32P51 320 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 C9orf64Q5T6V5 341 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 DARS2Q6PI48 645 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 VITQ6UXI7 678 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 KRT74Q7RTS7 529 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 FGD2Q7Z6J4 655 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 DAAM2Q86T65 1068 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF354CQ86Y25 554 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 MS4A14Q96JA4 679 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 FAR2Q96K12 515 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TMEM209Q96SK2 561 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TTC1Q99614 292 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 SLC46A2Q9BY10 475 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ABCG4Q9H172 646 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 MMADHCQ9H3L0 296 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 OLAHQ9NV23 265 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 POLR3BQ9NW08 1133 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 UTP6Q9NYH9 597 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 POLG2Q9UHN1 485 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 MSRAQ9UJ68 235 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 A0A0J9YYE9 177 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 A0A0U1RQJ8 604 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 A0A1W2PQU0 124 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 SLC5A10A0PJK1 596 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TRIM64A6NGJ6 449 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TBKBP1A7MCY6 615 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 K7EQS6 105 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TULP2O00295 520 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 EEF2KO00418 725 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 INSIG1O15503 277 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 IPO13O94829 963 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TRBC1P01850 177 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ASGR2P07307 311 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 PECAM1P16284 738 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TYRP1P17643 537 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 VIPR1P32241 457 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 PHBP35232 272 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ACADVLP49748 655 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 LRP8Q14114 963 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 LRRC32Q14392 662 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ADPRMQ3LIE5 342 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 FAM45BPQ6NSW5 357 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 GALNT18Q6P9A2 607 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TMCO3Q6UWJ1 677 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 HFE2Q6ZVN8 426 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 OTOP3Q7RTS5 596 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TRIM46Q7Z4K8 759 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 METTL25Q8N6Q8 603 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TMEM145Q8NBT3 493 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 FLVCR1-AS1Q8TAF5 88 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 FAM45AQ8TCE6 357 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 SETD7Q8WTS6 366 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CKAP2Q8WWK9 683 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ATRIPQ8WXE1 791 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 KLHL6Q8WZ60 621 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 LPGAT1Q92604 370 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CLIP3Q96DZ5 547 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ATP6V1G3Q96LB4 118 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 MAGEB18Q96M61 343 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 NSMCE3Q96MG7 304 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 UHRF1Q96T88 793 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TRIM6Q9C030 488 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 NEUROG2Q9H2A3 272 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 KIR3DX1Q9H7L2 352 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 PELI2Q9HAT8 420 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 BRF2Q9HAW0 419 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms