RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 TRMOQ9BU70 441 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 RNF39Q9H2S5 420 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 TCRBV5S2A0A599 114 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 KCNH1O95259 989 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 SIX3O95343 332 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 HLA-DQB2P05538 268 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 FCGR1AP12314 374 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 CDH3P22223 829 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 WARSP23381 471 aaKnown RBP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 EEF1B2P24534 225 aaKnown RBP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 CLCN5P51795 746 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 CDKN2DP55273 166 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 OXCT1P55809 520 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 LILRA4P59901 499 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 GRSF1Q12849 480 aaKnown RBP eCLIP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 BTG3Q14201 252 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 PCSK7Q16549 785 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 CYP2A13Q16696 494 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 SV2CQ496J9 727 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 CCNYL2Q5T2Q4 361 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 EGFLAMQ63HQ2 1017 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 WSCD1Q658N2 575 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 GPR142Q7Z601 462 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 PHYKPLQ8IUZ5 450 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 ARHGAP12Q8IWW6 846 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 GOLM1Q8NBJ4 401 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 SMG8Q8ND04 991 aaKnown RBP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 BPIFB6Q8NFQ5 453 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 DNAJB14Q8TBM8 379 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 PTCD2Q8WV60 388 aaKnown RBP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 TWIST2Q8WVJ9 160 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 ABHD8Q96I13 439 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 OSMRQ99650 979 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 C16orf70Q9BSU1 422 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 ZNF232Q9UNY5 417 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 USP22Q9UPT9 525 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 PCDHA9Q9Y5H5 950 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 ZFC3H1O60293 1989 aaKnown RBP13.71□□□□□ -0.22
HDAC7-228ENST00000548938 CFAP99D6REC4 459 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 CCL22O00626 93 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 AXLP30530 894 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 PNPLA4P41247 253 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ADARB1P78563 741 aaKnown RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 KCNC4Q03721 635 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 CD300CQ08708 224 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 RGS21Q2M5E4 152 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ZIK1Q3SY52 487 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 NIPAL1Q6NVV3 410 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 NOTUMQ6P988 496 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ZNF773Q6PK81 442 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 KIAA0408Q6ZU52 694 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 CLYBLQ8N0X4 340 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 TMEM125Q96AQ2 219 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 PTERQ96BW5 349 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 L3HYPDHQ96EM0 354 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 MRGPRX2Q96LB1 330 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 PARK7Q99497 189 aaKnown RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SLC30A3Q99726 388 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SMOQ99835 787 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 KATNBL1Q9H079 304 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 COL1A2P08123 1366 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 C1orf232A0A0U1RR37 186 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 H3BMM5 538 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 H3BRB1 525 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 CDK14O94921 469 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SNAI1O95863 264 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 BCL10O95999 233 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 CXCR3P49682 368 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 GEMP55040 296 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ISCA2Q86U28 154 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 TAC4Q86UU9 113 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ZMIZ2Q8NF64 920 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 OR52K2Q8NGK3 314 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 TRUB1Q8WWH5 349 aaKnown RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SNX19Q92543 992 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 VPS33AQ96AX1 596 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 PGAP3Q96FM1 320 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 MUS81Q96NY9 551 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SEPHS2Q99611 448 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 IL12RB2Q99665 862 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 TUBA1CQ9BQE3 449 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SIK2Q9H0K1 926 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ALG2Q9H553 416 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 PALMDQ9NP74 551 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 VTA1Q9NP79 307 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 MID1IP1Q9NPA3 183 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 NMRK2Q9NPI5 230 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 CRTAC1Q9NQ79 661 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 GID8Q9NWU2 228 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ANAPC2Q9UJX6 822 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 NEU3Q9UQ49 428 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ERGIC3Q9Y282 383 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 BTRCQ9Y297 605 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ZNF236Q9UL36 1845 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 LDLRP01130 860 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ALDH2P05091 517 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms