RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 LINC00523Q86TU6 105 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 MZB1Q8WU39 189 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 ALKBH8Q96BT7 664 aaKnown RBP20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 MED8Q96G25 268 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 CFAP36Q96G28 342 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 ORAI3Q9BRQ5 295 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 CEP41Q9BYV8 373 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 NOL6Q9H6R4 1146 aaKnown RBP20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 LRRC40Q9H9A6 602 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 CPNE5Q9HCH3 593 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 MOCS1Q9NZB8 636 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 ZNF212Q9UDV6 495 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 PIEZO2Q9H5I5 2752 aa20.05■□□□□ 0.8
CTDSP2-204ENST00000548823 IQANK1A0A1B0GTG1 560 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 FAM159BA6NKW6 160 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 ANXA9O76027 345 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 PGAM1P18669 254 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 GRIA1P42261 906 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 PCBP4P57723 403 aaKnown RBP20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 CAMK2GQ13555 558 aaPredicted RBP20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 KBTBD12Q3ZCT8 623 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 PRAMEF14Q5SWL7 426 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 FYB2Q5VWT5 728 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 NAPEPLDQ6IQ20 393 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 SERPINA13PQ6UXR4 307 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 SLC26A11Q86WA9 606 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 LRRC6Q86X45 466 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 SRRM1Q8IYB3 904 aaKnown RBP20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 EID2Q8N6I1 236 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 CNTD1Q8N815 330 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 BCAS4Q8TDM0 211 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 TTC17Q96AE7 1141 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 SKA1Q96BD8 255 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 SGSM3Q96HU1 749 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 TRABDQ9H4I3 376 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 GLOD4Q9HC38 313 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 NDFIP2Q9NV92 336 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 MPP6Q9NZW5 540 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 CLCA2Q9UQC9 943 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 MAD1L1Q9Y6D9 718 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 IKBKGQ9Y6K9 419 aa20.04■□□□□ 0.8
CTDSP2-204ENST00000548823 MAGEB16A2A368 324 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 YKT6O15498 198 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 ACSL4O60488 711 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 FAM107AO95990 144 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 INHBAP08476 426 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 KRT15P19012 456 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 TACR2P21452 398 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 PAPOLAP51003 745 aaKnown RBP20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 SHBQ15464 509 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 ZSCAN26Q16670 478 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 PARP15Q460N3 678 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 FAM182AQ5T1J6 154 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 RAP1GAP2Q684P5 730 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 CCDC117Q8IWD4 279 aaPredicted RBP20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 DCBLD1Q8N8Z6 715 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 NAF1Q96HR8 494 aaKnown RBP20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 ZNF578Q96N58 590 aaPredicted RBP20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 AGAP3Q96P47 875 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 SMC6Q96SB8 1091 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 MLPHQ9BV36 600 aaPredicted RBP20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 SGK2Q9HBY8 427 aa20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 IPO11Q9UI26 975 aaKnown RBP20.03■□□□□ 0.8
CTDSP2-204ENST00000548823 TIMM44O43615 452 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 LATS1O95835 1130 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 CREB1P16220 341 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 SLC11A2P49281 568 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 HARS2P49590 506 aaKnown RBP20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 GEMP55040 296 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 ZBTB16Q05516 673 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 MTM1Q13496 603 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 EFTUD2Q15029 972 aaKnown RBP eCLIP20.02■□□□□ 0.87e-7■■□□□ 14.4
CTDSP2-204ENST00000548823 SPANXN3Q5MJ09 141 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 LGSNQ5TDP6 509 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 NADSYN1Q6IA69 706 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 ARHGAP36Q6ZRI8 547 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 CHSY1Q86X52 802 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 MPP5Q8N3R9 675 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 SNRNP27Q8WVK2 155 aaKnown RBP20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 HIC2Q96JB3 615 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 CIPCQ9C0C6 399 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 KCNK9Q9NPC2 374 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 NKIRAS1Q9NYS0 192 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 BFARQ9NZS9 450 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 ZNF510Q9Y2H8 683 aa20.02■□□□□ 0.8
CTDSP2-204ENST00000548823 PLXNA2O75051 1894 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 FAM47DPA6NHR8 397 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 F5H5T6 163 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 CNTFP26441 200 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 MGAT1P26572 445 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 SERPINB9P50453 376 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 RENBPP51606 427 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 ALFQ53S48 1182 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 PRPF39Q86UA1 669 aaKnown RBP20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 SORCS1Q8WY21 1168 aa20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 RPRD1AQ96P16 312 aaPredicted RBP20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 PPANQ9NQ55 473 aaKnown RBP20.01■□□□□ 0.79
CTDSP2-204ENST00000548823 COL12A1Q99715 3063 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 STC2O76061 302 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 CNTN5O94779 1100 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms