RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ANKRD20A8PQ5CZ79 823 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 ADAMTSL4Q6UY14 1074 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 JAMLQ86YT9 394 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 ZDHHC1Q8WTX9 485 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 PATE1Q8WXA2 126 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 FATE1Q969F0 183 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 ABCG8Q9H221 673 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 IFNKQ9P0W0 207 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 MATN3O15232 486 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 PROSCO94903 275 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 HLA-DQB2P05538 268 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 ZNF30P17039 623 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 HNRNPH3P31942 346 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 CASP14P31944 242 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 ETV5P41161 510 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 GPR1P46091 355 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 STC1P52823 247 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 CTBSQ01459 385 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 ZSCAN23Q3MJ62 389 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 KIAA1614Q5VZ46 1190 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 TIGD7Q6NT04 549 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 DOK6Q6PKX4 331 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 SLC30A9Q6PML9 568 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 CCDC81Q6ZN84 652 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 ZNF765Q7L2R6 523 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 TRIM74Q86UV6 250 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 PQLC3Q8N755 202 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 ARRDC2Q8TBH0 407 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 SCAMP4Q969E2 229 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 TMEM159Q96B96 161 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 AP2M1Q96CW1 435 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 SCARF2Q96GP6 870 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 TSGA13Q96PP4 275 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 OR2M4Q96R27 311 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 PACSIN1Q9BY11 444 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 CDH19Q9H159 772 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 SEMA6CQ9H3T2 930 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 RDH14Q9HBH5 336 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 SDK2Q58EX2 2172 aa17.33■□□□□ 0.36
CHMP1A-205ENST00000548650 PIEZO2Q9H5I5 2752 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 GOLGA6L19H0YKK7 550 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 AGRPO00253 132 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 NVLO15381 856 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 B4GAT1O43505 415 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 ECEL1O95672 775 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 CPNE6O95741 557 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 PRLP01236 227 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 KRT10P13645 584 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 ADCY8P40145 1251 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 OR1D5P58170 312 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 PTSQ03393 145 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 GBE1Q04446 702 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 ITKQ08881 620 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 C16orf72Q14CZ0 275 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 PDK2Q15119 407 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 TGIF1Q15583 401 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 IFI16Q16666 785 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 PHF19Q5T6S3 580 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 NAGSQ8N159 534 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 LRRN4Q8WUT4 740 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 CCNL2Q96S94 520 aaPredicted RBP17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 AGAP2Q99490 1192 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 NUDT22Q9BRQ3 303 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 SEMA4CQ9C0C4 833 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 RBM22Q9NW64 420 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 FOXJ2Q9P0K8 574 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 CTTNBP2NLQ9P2B4 639 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 UVRAGQ9P2Y5 699 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 AMACRQ9UHK6 382 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 TTLL3Q9Y4R7 772 aa17.32■□□□□ 0.36
CHMP1A-205ENST00000548650 PRAMEF33A0A0G2JMD5 474 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 RHPN2P1A8MT19 583 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 EFSO43281 561 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 PRAMEF10O60809 474 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 LIPCP11150 499 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 PLA2G2AP14555 144 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 CCNCP24863 283 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 ACTR1BP42025 376 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 EPHB1P54762 984 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 ACTR1AP61163 376 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 NIPAL4Q0D2K0 466 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 NDUFAF2Q8N183 169 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 KCTD6Q8NC69 237 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 CTNNBL1Q8WYA6 563 aaPredicted RBP17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 HDAC11Q96DB2 347 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 COX14Q96I36 57 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 LYSMD1Q96S90 227 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 CMKLR1Q99788 373 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 DNPEPQ9ULA0 475 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 CHKBQ9Y259 395 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 TMEM98Q9Y2Y6 226 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 PLEKHM1Q9Y4G2 1056 aa17.31■□□□□ 0.36
CHMP1A-205ENST00000548650 C9orf172C9J069 976 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 KRT7P08729 469 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 CES1P23141 567 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 CSF2RBP32927 897 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 MAN1A1P33908 653 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms