RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 SH2B2O14492 632 aaPredicted RBP4.18□□□□□ -1.74
VPS29-205ENST00000548539 TIMM23O14925 209 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 ATP2A1O14983 1001 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 NDUFB4O95168 129 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 ALPLP05186 524 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 FGF2P09038 288 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 ARSBP15848 533 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 ANXA7P20073 488 aaKnown RBP4.18□□□□□ -1.74
VPS29-205ENST00000548539 TNFRSF1BP20333 461 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 PON1P27169 355 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 CHATP28329 748 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 COMPP49747 757 aaPredicted RBP4.18□□□□□ -1.74
VPS29-205ENST00000548539 ENTPD1P49961 510 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 CTTNQ14247 550 aaKnown RBP4.18□□□□□ -1.74
VPS29-205ENST00000548539 NEDD9Q14511 834 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 HNF4GQ14541 408 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 PMS2CLQ68D20 193 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 GPR139Q6DWJ6 353 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 SLC30A6Q6NXT4 461 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 B3GNT6Q6ZMB0 384 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 Q6ZTC4 211 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 DPPA4Q7L190 304 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 SHFQ7M4L6 423 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 KBTBD6Q86V97 674 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 IL17RCQ8NAC3 791 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 AGBL3Q8NEM8 1001 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 OR8K5Q8NH50 307 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 PIGOQ8TEQ8 1089 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 TRIB2Q92519 343 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 SLC22A18Q96BI1 424 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 HARBI1Q96MB7 349 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 ABHD1Q96SE0 405 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 ACOX2Q99424 681 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 PAFAH2Q99487 392 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 HRH4Q9H3N8 390 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 PIGMQ9H3S5 423 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 ESRP2Q9H6T0 727 aaKnown RBP4.18□□□□□ -1.74
VPS29-205ENST00000548539 PPP1R3EQ9H7J1 279 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 CATSPERBQ9H7T0 1116 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 CWC15Q9P013 229 aaKnown RBP4.18□□□□□ -1.74
VPS29-205ENST00000548539 NFKBIL1Q9UBC1 381 aaPredicted RBP4.18□□□□□ -1.74
VPS29-205ENST00000548539 SLC9A2Q9UBY0 812 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 INSL5Q9Y5Q6 135 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 CLIC4Q9Y696 253 aa4.18□□□□□ -1.74
VPS29-205ENST00000548539 CDRT15L2A8MXV6 281 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 JRKO75564 520 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 OAZ2O95190 189 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 KCNK5O95279 499 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 TMEM191BP0C7N4 346 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 NR2F1P10589 423 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 GNLYP22749 145 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 THBS3P49746 956 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 RASSF2P50749 326 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 RRP1P56182 461 aaKnown RBP4.17□□□□□ -1.74
VPS29-205ENST00000548539 ZP1P60852 638 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 CALD1Q05682 793 aaKnown RBP4.17□□□□□ -1.74
VPS29-205ENST00000548539 PCLAFQ15004 111 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 ADIPOQQ15848 244 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 TMEM266Q2M3C6 531 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 COLCA1Q6ZS62 124 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 AACSQ86V21 672 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 SPATA6LQ8N4H0 392 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 KCTD6Q8NC69 237 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 MPLKIPQ8TAP9 179 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 TMEM163Q8TC26 289 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 URB1-AS1Q96HZ7 61 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 LYZL4Q96KX0 146 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 TXLNGYQ9BZA5 131 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 KLHL4Q9C0H6 718 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 PAG1Q9NWQ8 432 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 PADI1Q9ULC6 663 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 CDC14AQ9UNH5 594 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 PROCRQ9UNN8 238 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 CMAHPQ9Y471 501 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 FAM169AQ9Y6X4 670 aa4.17□□□□□ -1.74
VPS29-205ENST00000548539 RPS10-NUDT3A0A1W2PQS6 291 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 OR2A25A4D2G3 310 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 TSPY2A6NKD2 308 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 OGG1O15527 345 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 ZIC3O60481 467 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 GPC4O75487 556 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 TSPY3P0CV98 308 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 TSPY8P0CW00 308 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 NAGAP17050 411 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 CD58P19256 250 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 IL11P20809 199 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 METAP2P50579 478 aaKnown RBP eCLIP4.16□□□□□ -1.74
VPS29-205ENST00000548539 HSD17B4P51659 736 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 TAS2R40P59535 323 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 TSPY1Q01534 308 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 TFAP4Q01664 338 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 SRSF1Q07955 248 aaKnown RBP eCLIP4.16□□□□□ -1.74
VPS29-205ENST00000548539 CDC16Q13042 620 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 RASA2Q15283 850 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 TWIST1Q15672 202 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 DLG2Q15700 870 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 NTRK2Q16620 822 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 KRT24Q2M2I5 525 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 PCGF3Q3KNV8 242 aa4.16□□□□□ -1.74
VPS29-205ENST00000548539 IGSF11Q5DX21 431 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms