RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 MAGEB2O15479 319 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 RNF8O76064 485 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 EGFP01133 1207 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 HNRNPA1P09651 372 aaKnown RBP eCLIP4.5□□□□□ -1.69
CBX5-203ENST00000547872 CSRP1P21291 193 aaKnown RBP4.5□□□□□ -1.69
CBX5-203ENST00000547872 CERS1P27544 350 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 ELF1P32519 619 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 PBX1P40424 430 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 CCR2P41597 374 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 CFHR3Q02985 330 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 TRDNQ13061 729 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 ATP1A4Q13733 1029 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 KCNB1Q14721 858 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 MFSD13AQ14CX5 517 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 LARS2Q15031 903 aaKnown RBP4.5□□□□□ -1.69
CBX5-203ENST00000547872 P3H1Q32P28 736 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 TAF1BQ53T94 588 aaPredicted RBP4.5□□□□□ -1.69
CBX5-203ENST00000547872 DGKKQ5KSL6 1271 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 ARL6IP4Q66PJ3 421 aaKnown RBP4.5□□□□□ -1.69
CBX5-203ENST00000547872 ANO7Q6IWH7 933 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 SYTL1Q8IYJ3 562 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 ZNF843Q8N446 348 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.5□□□□□ -1.69
CBX5-203ENST00000547872 RPLP0P6Q8NHW5 317 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 RLN3Q8WXF3 142 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 DDB2Q92466 427 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 MUL1Q969V5 352 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 TMEM143Q96AN5 459 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 WDR24Q96S15 920 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 EIF3CQ99613 913 aaKnown RBP4.5□□□□□ -1.69
CBX5-203ENST00000547872 NUSAP1Q9BXS6 441 aaKnown RBP4.5□□□□□ -1.69
CBX5-203ENST00000547872 SEMA4CQ9C0C4 833 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 CLMPQ9H6B4 373 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 NECTIN3Q9NQS3 549 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 DIAPH3Q9NSV4 1193 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 STK39Q9UEW8 545 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 SLC39A10Q9ULF5 831 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 NAP1L2Q9ULW6 460 aaPredicted RBP4.5□□□□□ -1.69
CBX5-203ENST00000547872 PCDHGA5Q9Y5G8 931 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 VWA8A3KMH1 1905 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 ZMYM2Q9UBW7 1377 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 AKAP13Q12802 2813 aa4.5□□□□□ -1.69
CBX5-203ENST00000547872 NBEAQ8NFP9 2946 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 ZMYM6O95789 1325 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 ZZEF1O43149 2961 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 IGKV6D-21A0A0A0MT36 114 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 TCRBV5S1A1TA0A578 114 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 FAM86B1E9PN63 330 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 SLC28A2O43868 658 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 FAM86B2P0C5J1 330 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 PCP11498 1178 aaKnown RBP4.49□□□□□ -1.69
CBX5-203ENST00000547872 CYP2A6P11509 494 aaPredicted RBP4.49□□□□□ -1.69
CBX5-203ENST00000547872 PTPN2P17706 415 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 GSTM5P46439 218 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 CFHR1Q03591 330 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 TWF1Q12792 350 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 FOXF2Q12947 444 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 FHL3Q13643 280 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 STARD3Q14849 445 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 SRSF7Q16629 238 aaKnown RBP eCLIP4.49□□□□□ -1.69
CBX5-203ENST00000547872 CEP55Q53EZ4 464 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 TMEM196Q5HYL7 178 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 GLRA4Q5JXX5 417 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 ANKRD45Q5TZF3 282 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 GRHL2Q6ISB3 625 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 TLDC1Q6P9B6 456 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 RASGRP3Q8IV61 690 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 ELMOD1Q8N336 334 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 SRBD1Q8N5C6 995 aaKnown RBP4.49□□□□□ -1.69
CBX5-203ENST00000547872 FRMD1Q8N878 549 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 LNX1Q8TBB1 728 aaPredicted RBP4.49□□□□□ -1.69
CBX5-203ENST00000547872 HDAC7Q8WUI4 952 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 SMARCD2Q92925 531 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 C5orf34Q96MH7 638 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 MBOAT7Q96N66 472 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 PGLYRP2Q96PD5 576 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 STK33Q9BYT3 514 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 MINDY3Q9H8M7 445 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 ZDHHC4Q9NPG8 344 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 NRBP2Q9NSY0 501 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 GDE1Q9NZC3 331 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 BCCIPQ9P287 314 aaKnown RBP eCLIP4.49□□□□□ -1.69
CBX5-203ENST00000547872 CDC23Q9UJX2 597 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 MAFFQ9ULX9 164 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 MAGED2Q9UNF1 606 aaPredicted RBP4.49□□□□□ -1.69
CBX5-203ENST00000547872 LRCH1Q9Y2L9 728 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 MYH9P35579 1960 aaKnown RBP4.49□□□□□ -1.69
CBX5-203ENST00000547872 ARID2Q68CP9 1835 aa4.49□□□□□ -1.69
CBX5-203ENST00000547872 CNTNAP2Q9UHC6 1331 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 ANTXRLA6NF34 631 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 OR2W5A6NFC9 320 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 CCDC69A6NI79 296 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 INO80B-WBP1J3KQ70 363 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 CLIC1O00299 241 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 PPP6CO00743 305 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 CAPN9O14815 690 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 SH3BP5O60239 455 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 PRAMEF2O60811 474 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 TUBB4AP04350 444 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms