RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TDRD1Q9BXT4 1180 aaKnown RBP15.49■□□□□ 0.07
BRF1-212ENST00000547562 SYTL2Q9HCH5 934 aa15.49■□□□□ 0.07
BRF1-212ENST00000547562 SCUBE2Q9NQ36 999 aa15.49■□□□□ 0.07
BRF1-212ENST00000547562 MRPL40Q9NQ50 206 aaKnown RBP15.49■□□□□ 0.07
BRF1-212ENST00000547562 RIMS3Q9UJD0 308 aa15.49■□□□□ 0.07
BRF1-212ENST00000547562 DNAJC15Q9Y5T4 150 aa15.49■□□□□ 0.07
BRF1-212ENST00000547562 ANKRD12Q6UB98 2062 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 CAPN8A6NHC0 703 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 E7ENX8 843 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 RHOBTB1O94844 696 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 PRLP01236 227 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 RHOCP08134 193 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 RPL17P18621 184 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 TUFMP49411 452 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 SGSHP51688 502 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 ATXN3P54252 364 aaPredicted RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 RARS2Q5T160 578 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 KIAA1191Q96A73 305 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 PLD4Q96BZ4 506 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 KLHL32Q96NJ5 620 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 FBRSL1Q9HCM7 1045 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 TAS2R13Q9NYV9 303 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 MTRRQ9UBK8 725 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 SUCOQ9UBS9 1254 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 MED16Q9Y2X0 877 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 LRRC14BA6NHZ5 514 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 C2orf81A6NN90 581 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 PPP6CO00743 305 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 MAP3K13O43283 966 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 KERAO60938 352 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 ALDOCP09972 364 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 GFAPP14136 432 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 PSMA3P25788 255 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 CORO1AP31146 461 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 FMO4P31512 558 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 OR1D2P34982 312 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 ACADVLP49748 655 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 TRIM25Q14258 630 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 SETMARQ53H47 684 aaPredicted RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 PAOXQ6QHF9 649 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 PAQR3Q6TCH7 311 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 FAM126BQ8IXS8 530 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 SNX31Q8N9S9 440 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 OR9I1Q8NGQ6 314 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 DCUN1D1Q96GG9 259 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 TCF12Q99081 682 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 DERL2Q9GZP9 239 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 CCDC68Q9H2F9 335 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 HMX1Q9NP08 348 aaPredicted RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 MID1IP1Q9NPA3 183 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 EPS15L1Q9UBC2 864 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 AGO1Q9UL18 857 aaKnown RBP15.48■□□□□ 0.07
BRF1-212ENST00000547562 FAM50BQ9Y247 325 aa15.48■□□□□ 0.07
BRF1-212ENST00000547562 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.47■□□□□ 0.07
BRF1-212ENST00000547562 PRSS51A0A1B0GVH4 220 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.47■□□□□ 0.07
BRF1-212ENST00000547562 CBX4O00257 560 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 AZIN1O14977 448 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 STC2O76061 302 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 SRP72O76094 671 aaKnown RBP15.47■□□□□ 0.07
BRF1-212ENST00000547562 ZNF177Q13360 481 aaPredicted RBP15.47■□□□□ 0.07
BRF1-212ENST00000547562 CYTH1Q15438 398 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 CHST9Q7L1S5 443 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 LILRA2Q8N149 483 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 STAG3L4Q8TBR4 150 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 NSUN5Q96P11 429 aaKnown RBP15.47■□□□□ 0.07
BRF1-212ENST00000547562 CWH43Q9H720 699 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 AKTIPQ9H8T0 292 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 COPS7BQ9H9Q2 264 aaPredicted RBP15.47■□□□□ 0.07
BRF1-212ENST00000547562 SPAG4Q9NPE6 437 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 ANAPC1Q9H1A4 1944 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 A0A1B0GVM2 712 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 LCHNA4D1U4 455 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 MRASO14807 208 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 TRIM24O15164 1050 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 NRP2O60462 931 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 NDUFS3O75489 264 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 PIM1P11309 404 aaPredicted RBP15.47■□□□□ 0.07
BRF1-212ENST00000547562 CES1P23141 567 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 STX1BP61266 288 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 FOLH1Q04609 750 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 GEN1Q17RS7 908 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 KANK2Q63ZY3 851 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 SPATA24Q86W54 205 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 LRRC43Q8N309 656 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 LPCAT1Q8NF37 534 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 TWIST2Q8WVJ9 160 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 GCNAQ96QF7 691 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 SMIM14Q96QK8 99 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 GKN1Q9NS71 199 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 RNF112Q9ULX5 631 aa15.47■□□□□ 0.07
BRF1-212ENST00000547562 CLASP2O75122 1294 aaKnown RBP15.46■□□□□ 0.07
BRF1-212ENST00000547562 F11P03951 625 aa15.46■□□□□ 0.07
BRF1-212ENST00000547562 HMGA1P17096 107 aaKnown RBP15.46■□□□□ 0.07
BRF1-212ENST00000547562 FOXA1P55317 472 aa15.46■□□□□ 0.07
BRF1-212ENST00000547562 ATP6V0D1P61421 351 aa15.46■□□□□ 0.07
BRF1-212ENST00000547562 RAD51Q06609 339 aa15.46■□□□□ 0.07
BRF1-212ENST00000547562 USP41Q3LFD5 358 aa15.46■□□□□ 0.07
BRF1-212ENST00000547562 FOXB2Q5VYV0 432 aa15.46■□□□□ 0.07
BRF1-212ENST00000547562 HACD2Q6Y1H2 254 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms