RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 ADCK1Q86TW2 530 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 ITIH5Q86UX2 942 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 PGAM4Q8N0Y7 254 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 MCOLN3Q8TDD5 553 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 TSSK3Q96PN8 268 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 RMND5AQ9H871 391 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 DNAJB4Q9UDY4 337 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 STRCQ7RTU9 1775 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 F8W810 466 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 GSNP06396 782 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 EPB42P16452 691 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 CES1P23141 567 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 GGT5P36269 586 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 IRF8Q02556 426 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 ARHGAP15Q53QZ3 475 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 KIAA0408Q6ZU52 694 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 NECAB2Q7Z6G3 386 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 CAMK1DQ8IU85 385 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 OR10T2Q8NGX3 314 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 LRTOMTQ8WZ04 291 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 MOCS1Q9NZB8 636 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 STK39Q9UEW8 545 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 EIF2B4Q9UI10 523 aaKnown RBP15.64■□□□□ 0.09
CUX1-211ENST00000546411 POLR3HQ9Y535 204 aaPredicted RBP15.64■□□□□ 0.09
CUX1-211ENST00000546411 PRMT5O14744 637 aaPredicted RBP15.64■□□□□ 0.09
CUX1-211ENST00000546411 MLYCDO95822 493 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 NCK1P16333 377 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 DGKAP23743 735 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 ATP6V1E1P36543 226 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 HSPA7P48741 367 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 GATMP50440 423 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 CLCQ05315 142 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 PLCL1Q15111 1095 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 MARCH8Q5T0T0 291 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 UPF1Q92900 1129 aaKnown RBP eCLIP15.64■□□□□ 0.09
CUX1-211ENST00000546411 CDK15Q96Q40 435 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 NMUR1Q9HB89 426 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 GABRQQ9UN88 632 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 NIPSNAP2O75323 286 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 CLDN11O75508 207 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 OR4F21O95013 312 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 FCGR1AP12314 374 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 CCND3P30281 292 aaPredicted RBP15.64■□□□□ 0.09
CUX1-211ENST00000546411 ACLYP53396 1101 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 PRMT9Q6P2P2 845 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 IFNL1Q8IU54 200 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 PLD3Q8IV08 490 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 STK40Q8N2I9 435 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 PARP8Q8N3A8 854 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 ZNF276Q8N554 614 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 SIDT2Q8NBJ9 832 aaKnown RBP15.64■□□□□ 0.09
CUX1-211ENST00000546411 ZNF558Q96NG5 402 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 TRMOQ9BU70 441 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 HIPK3Q9H422 1215 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 MRPL17Q9NRX2 175 aaKnown RBP15.64■□□□□ 0.09
CUX1-211ENST00000546411 ZNF229Q9UJW7 825 aa15.64■□□□□ 0.09
CUX1-211ENST00000546411 COL22A1Q8NFW1 1626 aaPredicted RBP15.63■□□□□ 0.09
CUX1-211ENST00000546411 RGS14O43566 566 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 CKMT2P17540 419 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 ALDH9A1P49189 494 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 INPP1P49441 399 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 C16orf72Q14CZ0 275 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 SLC5A9Q2M3M2 681 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 ARL14EPQ8N8R7 260 aaPredicted RBP15.63■□□□□ 0.09
CUX1-211ENST00000546411 OSCP1Q8WVF1 389 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 AUTS2Q8WXX7 1259 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 C9orf16Q9BUW7 83 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 ARHGAP39Q9C0H5 1083 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 ZNF556Q9HAH1 456 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 SCN3BQ9NY72 215 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 LEF1Q9UJU2 399 aaPredicted RBP15.63■□□□□ 0.09
CUX1-211ENST00000546411 COPG1Q9Y678 874 aaKnown RBP15.63■□□□□ 0.09
CUX1-211ENST00000546411 KIAA1551Q9HCM1 1747 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 A8MT66 165 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 SLC22A3O75751 556 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 SLC25A14O95258 325 aaPredicted RBP15.63■□□□□ 0.09
CUX1-211ENST00000546411 ITGB1P05556 798 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 ANXA5P08758 320 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 OR56A5P0C7T3 313 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 T-ENOLP0DO92 83 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
CUX1-211ENST00000546411 CCNHP51946 323 aaPredicted RBP15.63■□□□□ 0.09
CUX1-211ENST00000546411 ACAP2Q15057 778 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 ACOX1Q15067 660 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 GSTA3Q16772 222 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 ANO7Q6IWH7 933 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 GPR22Q99680 433 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 HAPLN1P10915 354 aaPredicted RBP15.63■□□□□ 0.09
CUX1-211ENST00000546411 ATP6V0D1P61421 351 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 TRIM32Q13049 653 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 SIRPB2Q5JXA9 342 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 DOK6Q6PKX4 331 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 YAF2Q8IY57 180 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 EMILIN2Q9BXX0 1053 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 OSBPL2Q9H1P3 480 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 IMPAD1Q9NX62 359 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 SNX8Q9Y5X2 465 aa15.63■□□□□ 0.09
CUX1-211ENST00000546411 SLC7A4O43246 635 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ECT2LQ008S8 904 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ABRQ12979 859 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms