RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 SLX1AQ9BQ83 275 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 EIF2AQ9BY44 585 aaKnown RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 PRKD2Q9BZL6 878 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 ADNPQ9H2P0 1102 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 WDCPQ9H6R7 721 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 ENTPD7Q9NQZ7 604 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 GDAP2Q9NXN4 497 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 ZNF639Q9UID6 485 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 SBF1O95248 1867 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 FNDC1Q4ZHG4 1894 aaPredicted RBP14.18□□□□□ -0.14
SRP54-202ENST00000546080 YJEFN3A6XGL0 299 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 CLDN25C9JDP6 229 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 PIRO00625 290 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 PMPCBO75439 489 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 CD4P01730 458 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 SHMT2P34897 504 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 IDUAP35475 653 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 BAG6P46379 1132 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 TAF6P49848 677 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 ZNF135P52742 658 aaPredicted RBP14.18□□□□□ -0.14
SRP54-202ENST00000546080 HERVK_113P63132 956 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 SH3BP2P78314 561 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 OXA1LQ15070 435 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 RABL3Q5HYI8 236 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 SLC27A1Q6PCB7 646 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 ARHGAP36Q6ZRI8 547 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 KDELC2Q7Z4H8 507 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 OSTM1Q86WC4 334 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 PTRH1Q86Y79 214 aaKnown RBP14.18□□□□□ -0.14
SRP54-202ENST00000546080 DCP1BQ8IZD4 617 aaKnown RBP14.18□□□□□ -0.14
SRP54-202ENST00000546080 ATPAF2Q8N5M1 289 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 ABHD11Q8NFV4 315 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 TUBGCP3Q96CW5 907 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 UBXN10Q96LJ8 280 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 ALPK1Q96QP1 1244 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 ERVK-6Q9BXR3 956 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 MROQ9BYG7 248 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 TKTL2Q9H0I9 626 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 ATXN3LQ9H3M9 355 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 MID1IP1Q9NPA3 183 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 WARS2Q9UGM6 360 aaKnown RBP14.18□□□□□ -0.14
SRP54-202ENST00000546080 VWA7Q9Y334 891 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 TSC22D4Q9Y3Q8 395 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 MYLKQ15746 1914 aa14.18□□□□□ -0.14
SRP54-202ENST00000546080 BPTFQ12830 3046 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 KDM1AO60341 852 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 RECQL4O94761 1208 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 LBPP18428 481 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 BDNFP23560 247 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 CCNCP24863 283 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 GSTM2P28161 218 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 APLP1P51693 650 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 PLA2G16P53816 162 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 DAOAP59103 153 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 ZNF33AQ06730 810 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 TTLL4Q14679 1199 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 FUT11Q495W5 492 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 RBM48Q5RL73 367 aaKnown RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 GPR158Q5T848 1215 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 IL31Q6EBC2 164 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 SULF1Q8IWU6 871 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 SMG8Q8ND04 991 aaKnown RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 SH3YL1Q96HL8 342 aaPredicted RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 ASB2Q96Q27 587 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 COLEC11Q9BWP8 271 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 R3HDMLQ9H3Y0 253 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 HMG20AQ9NP66 347 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 PDGFCQ9NRA1 345 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 SDR39U1Q9NRG7 319 aaPredicted RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 GINS2Q9Y248 185 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 DGKBQ9Y6T7 804 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 WDR90Q96KV7 1748 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 AZIN1O14977 448 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 RSL1D1O76021 490 aaKnown RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 GSTT2P0CG29 244 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 GSTT2BP0CG30 244 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 HGFP14210 728 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 ADRA1AP35348 466 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 PNPLA4P41247 253 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 LEPRP48357 1165 aaKnown RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 RABGGTBP53611 331 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 RAD23AP54725 363 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 KCNK10P57789 538 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 CCNA1P78396 465 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 NFKB2Q00653 900 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 SLC14A2Q15849 920 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 FSCN1Q16658 493 aaKnown RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 SV2CQ496J9 727 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 GTF2IRD2BQ6EKJ0 949 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 TMEM214Q6NUQ4 689 aaKnown RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 BLOC1S3Q6QNY0 202 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 PAQR9Q6ZVX9 377 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 GTF2IRD2Q86UP8 949 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 ITIH5Q86UX2 942 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 PHYKPLQ8IUZ5 450 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 UPF1Q92900 1129 aaKnown RBP eCLIP14.17□□□□□ -0.14
SRP54-202ENST00000546080 PGAP3Q96FM1 320 aaPredicted RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 RNF145Q96MT1 663 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 CHID1Q9BWS9 393 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 WDR12Q9GZL7 423 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms