RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 KCNK1O00180 336 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 NEMP1O14524 444 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 KLF4O43474 513 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 GPR32O75388 356 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 ZMPSTE24O75844 475 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 SUPT7LO94864 414 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 OR6B1O95007 311 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 RASAL1O95294 804 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 WISP3O95389 354 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 PGK1P00558 417 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 JCHAINP01591 159 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 VTNP04004 478 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 GJB1P08034 283 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 CELA2BP08218 269 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 SLC2A3P11169 496 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 ETS2P15036 469 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 JUNBP17275 347 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 DCKP27707 260 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 NMBRP28336 390 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 ATXN1P54253 815 aaKnown RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 PKNOX1P55347 436 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 EEFSECP57772 596 aaKnown RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 RPS26P62854 115 aaKnown RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 PLAURQ03405 335 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 DUSP28Q4G0W2 176 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 AGKQ53H12 422 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 PPM1LQ5SGD2 360 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 MARCH8Q5T0T0 291 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 CERCAMQ5T4B2 595 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 C6orf52Q5T4I8 152 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 AFMIDQ63HM1 303 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 IYDQ6PHW0 289 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 ABRAXAS1Q6UWZ7 409 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 RANBP10Q6VN20 620 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 AGMOQ6ZNB7 445 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 LARP4Q71RC2 724 aaKnown RBP eCLIP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 EEPD1Q7L9B9 569 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 SPRED1Q7Z699 444 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 PATL1Q86TB9 770 aaKnown RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 ZNF554Q86TJ5 538 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 CUZD1Q86UP6 607 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 PROSER1Q86XN7 944 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 PTRH1Q86Y79 214 aaKnown RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 MIER2Q8N344 545 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 FIBCD1Q8N539 461 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 CCNYL1Q8N7R7 359 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 KLHL23Q8NBE8 558 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 TXNDC5Q8NBS9 432 aaKnown RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 TRPV3Q8NET8 790 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 GPR150Q8NGU9 434 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 CLEC4CQ8WTT0 213 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 NXPE3Q969Y0 559 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 NXNL1Q96CM4 212 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 TMA16Q96EY4 203 aaKnown RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 ELMO2Q96JJ3 720 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 UBXN10Q96LJ8 280 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 C1orf74Q96LT6 269 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 KLHL32Q96NJ5 620 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 NECAB3Q96P71 396 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 APBA2Q99767 749 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 LBHD1Q9BQE6 289 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 MED10Q9BTT4 135 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 OSBPL10Q9BXB5 764 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 SHCBP1LQ9BZQ2 653 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 SLC25A51Q9H1U9 297 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 MFSD1Q9H3U5 465 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 DPEP3Q9H4B8 488 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 POMKQ9H5K3 350 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 ZNF408Q9H9D4 720 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 AGPAT4Q9NRZ5 378 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 FAIMQ9NVQ4 179 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 DDIT4Q9NX09 232 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 OSER1Q9NX31 292 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 GTSE1Q9NYZ3 720 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 PKD2L2Q9NZM6 624 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 SLC17A6Q9P2U8 582 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 HSFX1Q9UBD0 423 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 RBPJLQ9UBG7 517 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 OR12D3Q9UGF7 316 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 FAF1Q9UNN5 650 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-225ENST00000545920 RNF11Q9Y3C5 154 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 TRAF6Q9Y4K3 522 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 NME7Q9Y5B8 376 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 SLC30A1Q9Y6M5 507 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 WDR90Q96KV7 1748 aa6.47□□□□□ -1.37
SNHG1-225ENST00000545920 COL4A4P53420 1690 aaPredicted RBP6.46□□□□□ -1.37
SNHG1-225ENST00000545920 DHRS12A0PJE2 317 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 DCDC2BA2VCK2 349 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 C7orf72A4D263 438 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 IQCA1LA6NCM1 817 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 C16orf96A6NNT2 1141 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 A8MT66 165 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 KCNU1A8MYU2 1149 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 E7ENX8 843 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 UBXN8O00124 270 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ANGPT2O15123 496 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PHGDHO43175 533 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 AKAP10O43572 662 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TULP3O75386 442 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms