RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 SCN4BQ8IWT1 228 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 RYBPQ8N488 228 aaPredicted RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 MINDY1Q8N5J2 469 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 TRIML2Q8N7C3 387 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 PPWD1Q96BP3 646 aaKnown RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 HOPXQ9BPY8 73 aaPredicted RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 SP110Q9HB58 689 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 PADI3Q9ULW8 664 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 NDUFAF1Q9Y375 327 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 ARL5AQ9Y689 179 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 IGLV3-10A0A075B6K4 115 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 CCDC162PA2VCL2 907 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 AQP12BA6NM10 295 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 CD3EAPO15446 510 aaKnown RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 AKAP10O43572 662 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 HSPA8P11142 646 aaKnown RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 HSD17B1P14061 328 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 ZNF37AP17032 561 aaPredicted RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 SLC6A2P23975 617 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 CDK9P50750 372 aaKnown RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 TBX4P57082 545 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 ATP6V0D1P61421 351 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 CACNB2Q08289 660 aaPredicted RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 CAPRIN1Q14444 709 aaKnown RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 SPPL2CQ8IUH8 684 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 AQP12AQ8IXF9 295 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 MFSD2AQ8NA29 543 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 GPR150Q8NGU9 434 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 FAM81AQ8TBF8 368 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 RMND5BQ96G75 393 aaPredicted RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 UPF3AQ9H1J1 476 aaKnown RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 RSL24D1Q9UHA3 163 aaKnown RBP15.25■□□□□ 0.03
CNN3-207ENST00000545882 EGFL7Q9UHF1 273 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 IKZF3Q9UKT9 509 aa15.25■□□□□ 0.03
CNN3-207ENST00000545882 FAM149AA5PLN7 773 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 TRIM64CA6NLI5 447 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 MUSKO15146 869 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 GPR182O15218 404 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 HNRNPRO43390 633 aaKnown RBP15.24■□□□□ 0.03
CNN3-207ENST00000545882 B4GALT3O60512 393 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 KPNA6O60684 536 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 MATN4O95460 622 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 GNAO1P09471 354 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 PRSS56P0CW18 603 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 ETFBP38117 255 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 APLP1P51693 650 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 EMP3P54852 163 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 TUBA4AP68366 448 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 PFKFB4Q16877 469 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 SETMARQ53H47 684 aaPredicted RBP15.24■□□□□ 0.03
CNN3-207ENST00000545882 TBCELQ5QJ74 424 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 LCN8Q6JVE9 175 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 KRT80Q6KB66 452 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 CXCL17Q6UXB2 119 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 SERINC5Q86VE9 423 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 MIER2Q8N344 545 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 CBR4Q8N4T8 237 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 FAM47BQ8NA70 645 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 OR13C4Q8NGS5 318 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 HM13Q8TCT9 377 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 ASB2Q96Q27 587 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 MTG1Q9BT17 334 aaPredicted RBP15.24■□□□□ 0.03
CNN3-207ENST00000545882 TRIM8Q9BZR9 551 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 LIN28AQ9H9Z2 209 aaKnown RBP15.24■□□□□ 0.03
CNN3-207ENST00000545882 AGPAT4Q9NRZ5 378 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 SMOXQ9NWM0 555 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 SCML2Q9UQR0 700 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 VWA8A3KMH1 1905 aa15.24■□□□□ 0.03
CNN3-207ENST00000545882 TNPO2O14787 897 aaKnown RBP15.23■□□□□ 0.03
CNN3-207ENST00000545882 BMP10O95393 424 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 GLP2RO95838 553 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 TYMPP19971 482 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 CTGFP29279 349 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 OXTRP30559 389 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 ZFP36L2P47974 494 aaKnown RBP15.23■□□□□ 0.03
CNN3-207ENST00000545882 MAP7D1Q3KQU3 841 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 SLC39A12Q504Y0 691 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 INTS11Q5TA45 600 aaKnown RBP15.23■□□□□ 0.03
CNN3-207ENST00000545882 FBXL22Q6P050 247 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 MON1AQ86VX9 555 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 ADGRG5Q8IZF4 528 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 RHEBL1Q8TAI7 183 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 TRPC4APQ8TEL6 797 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 DIS3LQ8TF46 1054 aaKnown RBP15.23■□□□□ 0.03
CNN3-207ENST00000545882 GAB3Q8WWW8 586 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 CLK4Q9HAZ1 481 aaKnown RBP15.23■□□□□ 0.03
CNN3-207ENST00000545882 TIMMDC1Q9NPL8 285 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 SDR39U1Q9NRG7 319 aaPredicted RBP15.23■□□□□ 0.03
CNN3-207ENST00000545882 THEGQ9P2T0 379 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 POLG2Q9UHN1 485 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 SLC8A2Q9UPR5 921 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 AURKCQ9UQB9 309 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 BTRCQ9Y297 605 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 PCDHA9Q9Y5H5 950 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 HEMK1Q9Y5R4 338 aaPredicted RBP15.23■□□□□ 0.03
CNN3-207ENST00000545882 CENPFP49454 3210 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 FRMPD3Q5JV73 1810 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 A0A0U1RQF3 1178 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 DHRS12A0PJE2 317 aa15.23■□□□□ 0.03
CNN3-207ENST00000545882 CLASP2O75122 1294 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 363 ms