RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 EML5Q05BV3 1969 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 GLYATL1P3A0A0U1RQE8 302 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 FAM159BA6NKW6 160 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 K7ESF4 209 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 AURKAO14965 403 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 LAMTOR5O43504 91 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 RNGTTO60942 597 aaKnown RBP15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 BANF1O75531 89 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 ACSL3O95573 720 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 PRKCGP05129 697 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 C1SP09871 688 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 C6P13671 934 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 BPIP17213 487 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 CD6P30203 668 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 SSTR1P30872 391 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 TTPAP49638 278 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 CACNG1Q06432 222 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 THOC5Q13769 683 aaKnown RBP15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 SLC29A2Q14542 456 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 POM121L1PQ3SYA9 428 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 MARK2Q7KZI7 788 aaKnown RBP15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 SNX20Q7Z614 316 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 SDCCAG8Q86SQ7 713 aaPredicted RBP15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 LRRC6Q86X45 466 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 TRAM1L1Q8N609 369 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 CADM4Q8NFZ8 388 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 FCRL3Q96P31 734 aaPredicted RBP15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 LENG8Q96PV6 779 aaPredicted RBP15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 VPS35Q96QK1 796 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 HHIPQ96QV1 700 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 C1QTNF2Q9BXJ5 285 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 EPB41L4BQ9H329 900 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 ACBD3Q9H3P7 528 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 PLAC1Q9HBJ0 212 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 C20orf96Q9NUD7 363 aaPredicted RBP15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 SPATA6Q9NWH7 488 aaPredicted RBP15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 DMTF1Q9Y222 760 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 SLC30A1Q9Y6M5 507 aa15.97■□□□□ 0.15
PRPF40A-212ENST00000545856 F8W8V4 182 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 AXIN1O15169 862 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 LATO43561 262 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 LZTS3O60299 673 aaPredicted RBP15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 PCDH8O95206 1070 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 VAPBO95292 243 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 SEMA4FO95754 770 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 MTM1Q13496 603 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 UAP1Q16222 522 aaPredicted RBP15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 ZNF528Q3MIS6 628 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 USP39Q53GS9 565 aaKnown RBP15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 FASTKD1Q53R41 847 aaKnown RBP15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 HENMT1Q5T8I9 393 aaKnown RBP15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 NEPROQ6NW34 567 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 TAOK1Q7L7X3 1001 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 TDRPQ86YL5 185 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 OR13C4Q8NGS5 318 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 OR6P1Q8NGX9 317 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 HDAC10Q969S8 669 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 EID2BQ96D98 161 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 NUS1Q96E22 293 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 TBATAQ96M53 351 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 ZNF778Q96MU6 729 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 CATSPERZQ9NTU4 200 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 INTS10Q9NVR2 710 aaKnown RBP15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 WSB2Q9NYS7 404 aaPredicted RBP15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 VPS18Q9P253 973 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 ZNF180Q9UJW8 692 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 CUL9Q8IWT3 2517 aa15.96■□□□□ 0.15
PRPF40A-212ENST00000545856 SPAG17Q6Q759 2223 aa15.96■□□□□ 0.14
PRPF40A-212ENST00000545856 CEP192Q8TEP8 1941 aa15.96■□□□□ 0.14
PRPF40A-212ENST00000545856 PLXNB3Q9ULL4 1909 aa15.96■□□□□ 0.14
PRPF40A-212ENST00000545856 TRBV5-4A0A0C4DH59 114 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 EXOC1LA0A1B0GW35 172 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 SRP72O76094 671 aaKnown RBP15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 RECQL5O94762 991 aaPredicted RBP15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 PRAMEF1O95521 474 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 CNTFP26441 200 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 ARNTP27540 789 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 MC4RP32245 332 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 CSE1LP55060 971 aaKnown RBP15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 ADARP55265 1226 aaKnown RBP15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 XIAPP98170 497 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 SGCGQ13326 291 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 NFATC2Q13469 925 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 ITIH4Q14624 930 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 CASP8Q14790 479 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 ACOX1Q15067 660 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 TYSND1Q2T9J0 566 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 SETMARQ53H47 684 aaPredicted RBP15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 HSD11B1LQ7Z5J1 315 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 WDR5BQ86VZ2 330 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 CACUL1Q86Y37 369 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 IQCKQ8N0W5 287 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 FBF1Q8TES7 1133 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 CPNE1Q99829 537 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 IL26Q9NPH9 171 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 TXNDC16Q9P2K2 825 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 FKBPLQ9UIM3 349 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 RABGEF1Q9UJ41 708 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 IKBKGQ9Y6K9 419 aa15.95■□□□□ 0.14
PRPF40A-212ENST00000545856 KMT2EQ8IZD2 1858 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms