RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SLC39A13Q96H72 371 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 TEX37Q96LM6 180 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 PIF1Q9H611 641 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 UBA6A0AVT1 1052 aaPredicted RBP15.77■□□□□ 0.11
LDLR-204ENST00000545707 DLGAP1O14490 977 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 ANGPT2O15123 496 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 GPR182O15218 404 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 STAMBPO95630 424 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 MT-ND1P03886 318 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 NCK1P16333 377 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 RHOQP17081 205 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 PRDX3P30048 256 aaKnown RBP15.77■□□□□ 0.11
LDLR-204ENST00000545707 RABL3Q5HYI8 236 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 PPP4R4Q6NUP7 873 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 ERMP1Q7Z2K6 904 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 ZNF280BQ86YH2 543 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 PHYKPLQ8IUZ5 450 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 TRPV1Q8NER1 839 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 DTNBP1Q96EV8 351 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 B3GALT6Q96L58 329 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 SMOXQ9NWM0 555 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 TLR6Q9Y2C9 796 aa15.77■□□□□ 0.11
LDLR-204ENST00000545707 WASH4PA8MWX3 477 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 H0YJX3 145 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 CLASP2O75122 1294 aaKnown RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 PYGLP06737 847 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 ZNF37AP17032 561 aaPredicted RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 SLC6A2P23975 617 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 RPS6KA2Q15349 733 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 MAPRE1Q15691 268 aaKnown RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 FUT11Q495W5 492 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 TMEM259Q4ZIN3 620 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 HACD2Q6Y1H2 254 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 LRRC49Q8IUZ0 686 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 MIER2Q8N344 545 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 DCBLD1Q8N8Z6 715 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 GABPB2Q8TAK5 448 aaPredicted RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 TFAP2CQ92754 450 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 DUS3LQ96G46 650 aaKnown RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 C1orf74Q96LT6 269 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 TCF12Q99081 682 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 HAUS8Q9BT25 410 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 PNPLA3Q9NST1 481 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 CCM2LQ9NUG4 571 aaPredicted RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 RSL24D1Q9UHA3 163 aaKnown RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 POLG2Q9UHN1 485 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 USP22Q9UPT9 525 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 LOC285095A0A1B0GVY8 99 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 DHRS12A0PJE2 317 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 SUPT3HB4E1H0 165 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 SUPT3HO75486 399 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 BMP2P12643 396 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 EEF1DP29692 281 aaKnown RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 FMO4P31512 558 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 CASP2P42575 452 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 POLD3Q15054 466 aaPredicted RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 PAQR3Q6TCH7 311 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 LPCAT2Q7L5N7 544 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 CMTR2Q8IYT2 770 aaKnown RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 ZNF786Q8N393 782 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 ANKFN1Q8N957 763 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 FAM81AQ8TBF8 368 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 ROPN1LQ96C74 230 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 SUSD3Q96L08 255 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 RPRD1AQ96P16 312 aaPredicted RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 ANKRD60Q9BZ19 345 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 MUC3BQ9H195 1237 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 TMEM248Q9NWD8 314 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 SLAMF8Q9P0V8 285 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 GALPQ9UBC7 116 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 PADI4Q9UM07 663 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 PHF24Q9UPV7 400 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 NDUFAF1Q9Y375 327 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 V9GYQ6 96 aa15.76■□□□□ 0.11
LDLR-204ENST00000545707 COL4A4P53420 1690 aaPredicted RBP15.76■□□□□ 0.11
LDLR-204ENST00000545707 A0A0U1RQF3 1178 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 ENPP3O14638 875 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 AGTR2P50052 363 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 SH3BGRP55822 239 aaPredicted RBP15.75■□□□□ 0.11
LDLR-204ENST00000545707 MGAT3Q09327 533 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 MSANTD2Q6P1R3 559 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 MON1AQ86VX9 555 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 CFAP52Q8N1V2 620 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 ATAD1Q8NBU5 361 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 RIN3Q8TB24 985 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 ATOH8Q96SQ7 321 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 SOX17Q9H6I2 414 aaPredicted RBP15.75■□□□□ 0.11
LDLR-204ENST00000545707 ARMC1Q9NVT9 282 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 FNDC3AQ9Y2H6 1198 aaKnown RBP15.75■□□□□ 0.11
LDLR-204ENST00000545707 MIA3Q5JRA6 1907 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 RNF103-CHMP3A0A140T963 221 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 ALDH3B2P48448 385 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 CDKN1CP49918 316 aaPredicted RBP15.75■□□□□ 0.11
LDLR-204ENST00000545707 ATP4BP51164 291 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 HPCAP84074 193 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 NFKB2Q00653 900 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 TSNQ15631 228 aaKnown RBP15.75■□□□□ 0.11
LDLR-204ENST00000545707 BORAQ6PGQ7 559 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 SERINC5Q86VE9 423 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 TEX26Q8N6G2 289 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms