RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PIP5K1BO14986 540 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 ATP6V1G1O75348 118 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 ESRRBO95718 433 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 S1PR4O95977 384 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 F2P00734 622 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 LDLRP01130 860 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 CD1DP15813 335 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 FDXRP22570 491 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 RPL10P27635 214 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 SUOXP51687 545 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 CDKN2DP55273 166 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 C21orf59P57076 290 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 SH3BP2P78314 561 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 ADARB1P78563 741 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 TNK2Q07912 1038 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 CBX3Q13185 183 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 RCAN2Q14206 197 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 VPS26BQ4G0F5 336 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 AARS2Q5JTZ9 985 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 GPR158Q5T848 1215 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 GPR107Q5VW38 600 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 FAM117BQ6P1L5 589 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 ZNF773Q6PK81 442 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 TMEM207Q6UWW9 146 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 KCTD8Q6ZWB6 473 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 EFL1Q7Z2Z2 1120 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 RTL3Q8N8U3 475 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 ARRDC4Q8NCT1 418 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 DDHD1Q8NEL9 900 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 OR13F1Q8NGS4 319 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 PEX13Q92968 403 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 PTERQ96BW5 349 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 FBXL20Q96IG2 436 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 PLEKHA8Q96JA3 519 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 ALG2Q9H553 416 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 POLR3BQ9NW08 1133 aaPredicted RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 GMIPQ9P107 970 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 EGFL7Q9UHF1 273 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 B3GNT3Q9Y2A9 372 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 ANKRD12Q6UB98 2062 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 UBXN8O00124 270 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 PAGE1O75459 146 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 EEDO75530 441 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 SNAI1O95863 264 aaPredicted RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 MT-CO1P00395 513 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 NPPAP01160 153 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 PRR35P0CG20 571 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 SMPD1P17405 629 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 UGT1A6P19224 532 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 GSK3BP49841 420 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 RABGGTBP53611 331 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 RPS6KA2Q15349 733 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 CYP51A1Q16850 503 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 PRR23BQ6ZRT6 265 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 PROSER1Q86XN7 944 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 PTGR2Q8N8N7 351 aaPredicted RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 CHPT1Q8WUD6 406 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 KCTD14Q9BQ13 255 aaPredicted RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 TDRD1Q9BXT4 1180 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 PAIP1Q9H074 479 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 SMOC2Q9H3U7 446 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 IL1RL2Q9HB29 575 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 MID1IP1Q9NPA3 183 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 RGS18Q9NS28 235 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 POLG2Q9UHN1 485 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 PAIP2BQ9ULR5 123 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 GPR45Q9Y5Y3 372 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 SRCAPQ6ZRS2 3230 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 A0A1W2PPW3 197 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 INPP4BO15327 924 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 TPST1O60507 370 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 SEC24DO94855 1032 aaPredicted RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 CCNA2P20248 432 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 HTR1EP28566 365 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 CCR1P32246 355 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 KCNC1P48547 511 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 RENBPP51606 427 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 KCNK10P57789 538 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 ACVR1Q04771 509 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 LCP2Q13094 533 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 GRB7Q14451 532 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 CBX2Q14781 532 aaPredicted RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 CRY1Q16526 586 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 GEN1Q17RS7 908 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 ARTNQ5T4W7 220 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 DCDC5Q6ZRR9 648 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 TMEM26Q6ZUK4 368 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 CTU1Q7Z7A3 348 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 GPRC5AQ8NFJ5 357 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 GPR150Q8NGU9 434 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 TRUB1Q8WWH5 349 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 MYLPFQ96A32 169 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 TUBGCP3Q96CW5 907 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 NRBF2Q96F24 287 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 MAGED4Q96JG8 741 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 BDH2Q9BUT1 245 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms