RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	MARCKSL1	P49006	195 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	SPINT3	P49223	89 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	VAV2	P52735	878 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	DYNLT1	P63172	113 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	CDK18	Q07002	472 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	WASHC5	Q12768	1159 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	XRCC4	Q13426	336 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	ISX	Q2M1V0	245 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	HENMT1	Q5T8I9	393 aa	Known RBP	13.35	□□□□□ -0.27
POLE-222	ENST00000545015	DENND2C	Q68D51	928 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	RFLNA	Q6ZTI6	216 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	BBS12	Q6ZW61	710 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	RD3	Q7Z3Z2	195 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	NRROS	Q86YC3	692 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	KY	Q8NBH2	561 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	KRT35	Q92764	455 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	P3H4	Q92791	437 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	WDR24	Q96S15	920 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	SRPK1	Q96SB4	655 aa	Known RBP	13.35	□□□□□ -0.27
POLE-222	ENST00000545015	TMEM168	Q9H0V1	697 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	CDH19	Q9H159	772 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	MAGEE1	Q9HCI5	957 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	CYP4F12	Q9HCS2	524 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	APPL1	Q9UKG1	709 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	GPSM3	Q9Y4H4	160 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	CFAP47	Q6ZTR5	3102 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	ASXL3	Q9C0F0	2248 aa		13.35	□□□□□ -0.27
POLE-222	ENST00000545015	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015		A0A0U1RQS6	177 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	C1orf232	A0A0U1RR37	186 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CCDC66	A2RUB6	948 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	APOC4-APOC2	K7ER74	178 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	NOBOX	O60393	691 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CS	O75390	466 aa	Known RBP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	EPO	P01588	193 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	APOC2	P02655	101 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	GLB1	P16278	677 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CD68	P34810	354 aa	Predicted RBP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	LSS	P48449	732 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	DCDC1	P59894	354 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	PEX6	Q13608	980 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CERCAM	Q5T4B2	595 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	RBM44	Q6ZP01	1051 aa	Known RBP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	TAF8	Q7Z7C8	310 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	LRRC57	Q8N9N7	239 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	SNIP1	Q8TAD8	396 aa	Known RBP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CCHCR1	Q8TD31	782 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	SCAMP4	Q969E2	229 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	EID2B	Q96D98	161 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	AGAP3	Q96P47	875 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	BAG1	Q99933	345 aa	Predicted RBP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CCDC3	Q9BQI4	270 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	GSDMC	Q9BYG8	508 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CEP41	Q9BYV8	373 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	LACRT	Q9GZZ8	138 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CARS2	Q9HA77	564 aa	Known RBP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	VPS18	Q9P253	973 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	SAE1	Q9UBE0	346 aa	Predicted RBP	13.34	□□□□□ -0.27
POLE-222	ENST00000545015	SUFU	Q9UMX1	484 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	RAX	Q9Y2V3	346 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	PCDHB1	Q9Y5F3	818 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	DUSP10	Q9Y6W6	482 aa		13.34	□□□□□ -0.27
POLE-222	ENST00000545015	CHD6	Q8TD26	2715 aa		13.33	□□□□□ -0.27
POLE-222	ENST00000545015	LOC285095	A0A1B0GVY8	99 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	NUDT21	O43809	227 aa	Known RBP	13.33	□□□□□ -0.28
POLE-222	ENST00000545015	NDST3	O95803	873 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	ILF3	Q12906	894 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
POLE-222	ENST00000545015	LRP8	Q14114	963 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	NR1D2	Q14995	579 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	NOMO1	Q15155	1222 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	C14orf28	Q4W4Y0	310 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	KAZN	Q674X7	775 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	TMC3	Q7Z5M5	1100 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	LSMEM2	Q8N112	164 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	FAM46D	Q8NEK8	389 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	CCL4L1	Q8NHW4	92 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	KIAA1524	Q8TCG1	905 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	CCDC74A	Q96AQ1	378 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	HIC2	Q96JB3	615 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	FCRL5	Q96RD9	977 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	AGAP2	Q99490	1192 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	RIOK2	Q9BVS4	552 aa	Known RBP	13.33	□□□□□ -0.28
POLE-222	ENST00000545015	FAM83D	Q9H4H8	585 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	ZFYVE1	Q9HBF4	777 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	RAD18	Q9NS91	495 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	PKD2L2	Q9NZM6	624 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	SEPT10	Q9P0V9	454 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	GULP1	Q9UBP9	304 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	CD84	Q9UIB8	345 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	CNOT6	Q9ULM6	557 aa	Known RBP	13.33	□□□□□ -0.28
POLE-222	ENST00000545015	PCDHGA8	Q9Y5G5	932 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	ENTPD2	Q9Y5L3	495 aa		13.33	□□□□□ -0.28
POLE-222	ENST00000545015	MT-CYB	P00156	380 aa	Predicted RBP	13.32	□□□□□ -0.28
POLE-222	ENST00000545015	ADCY8	P40145	1251 aa		13.32	□□□□□ -0.28
POLE-222	ENST00000545015	MLLT3	P42568	568 aa	Predicted RBP	13.32	□□□□□ -0.28
POLE-222	ENST00000545015	PDX1	P52945	283 aa		13.32	□□□□□ -0.28
POLE-222	ENST00000545015	TBC1D25	Q3MII6	688 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms