RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ITIH2P19823 946 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 NFKB1P19838 968 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 CD68P34810 354 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-206ENST00000544964 CSNK1DP48730 415 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 DUSP3P51452 185 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-206ENST00000544964 PDX1P52945 283 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 PCBP4P57723 403 aaKnown RBP12.49□□□□□ -0.41
ACTN1-206ENST00000544964 RAD51Q06609 339 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 IHHQ14623 411 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 ISXQ2M1V0 245 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 ANKRD20A2Q5SQ80 823 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 ANKRD20A1Q5TYW2 823 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 ANKRD20A3Q5VUR7 823 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 TTC27Q6P3X3 843 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 GDPD4Q6W3E5 623 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 PRUNE1Q86TP1 453 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 CAMK1DQ8IU85 385 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 SLC35F3Q8IY50 421 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 PHACTR4Q8IZ21 702 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 TP53I13Q8NBR0 393 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-206ENST00000544964 ARRDC2Q8TBH0 407 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 CCDC110Q8TBZ0 833 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 MAPK15Q8TD08 544 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 LMX1AQ8TE12 382 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 MAGOHBQ96A72 148 aaKnown RBP12.49□□□□□ -0.41
ACTN1-206ENST00000544964 TBATAQ96M53 351 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 ZNF578Q96N58 590 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-206ENST00000544964 BOCQ9BWV1 1114 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 POLR1BQ9H9Y6 1135 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 GLOD4Q9HC38 313 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 MBNL1Q9NR56 388 aaKnown RBP12.49□□□□□ -0.41
ACTN1-206ENST00000544964 APOBEC3BQ9UH17 382 aaKnown RBP12.49□□□□□ -0.41
ACTN1-206ENST00000544964 AMACRQ9UHK6 382 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 PCDHGC4Q9Y5F7 938 aa12.49□□□□□ -0.41
ACTN1-206ENST00000544964 TSPAN11A1L157 253 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 PMS2P1A4D2B8 440 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 EME2A4GXA9 379 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 CFAP69A5D8W1 941 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 TPP1O14773 563 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 MMP20O60882 483 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 PHF2O75151 1096 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 IFNB1P01574 187 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 CELA2BP08218 269 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 MMP2P08253 660 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 ETS1P14921 441 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 CD86P42081 329 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 LSSP48449 732 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 AP1S1P61966 158 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 BCL2L1Q07817 233 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 IRF4Q15306 451 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 PERM1Q5SV97 790 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 DRICH1Q6PGQ1 229 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 CRTC1Q6UUV9 634 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 MACC1Q6ZN28 852 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 EFL1Q7Z2Z2 1120 aaKnown RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 TAB3Q8N5C8 712 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 ZNF248Q8NDW4 579 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 NAF1Q96HR8 494 aaKnown RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 RBM15Q96T37 977 aaKnown RBP eCLIP12.48□□□□□ -0.418e-6■■■■■ 30.1
ACTN1-206ENST00000544964 VAT1Q99536 393 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 CPEB1Q9BZB8 566 aaKnown RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 CLPBQ9H078 707 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 ATP13A3Q9H7F0 1226 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 HOMER3Q9NSC5 361 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 EVA1BQ9NVM1 165 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 HAUS2Q9NVX0 235 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 UBP1Q9NZI7 540 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 NCKIPSDQ9NZQ3 722 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 DKK3Q9UBP4 350 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 RSPH14Q9UHP6 348 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 TRHDEQ9UKU6 1024 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 DRG1Q9Y295 367 aaKnown RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 ENTPD2Q9Y5L3 495 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 ARHGEF17Q96PE2 2063 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-206ENST00000544964 SPTA1P02549 2419 aa12.48□□□□□ -0.41
ACTN1-206ENST00000544964 UNC13CQ8NB66 2214 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 TLN1Q9Y490 2541 aaKnown RBP12.47□□□□□ -0.41
ACTN1-206ENST00000544964 GOLGA6L10A0A0M3HER8 536 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 TEX51A0A1B0GUA7 166 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 CPED1A4D0V7 1026 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 C5orf60A6NFR6 353 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 EIF4E1BA6NMX2 242 aaKnown RBP12.47□□□□□ -0.41
ACTN1-206ENST00000544964 ESPNB1AK53 854 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 LMO7DNF2Z398 122 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 TK2O00142 265 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 TM7SF2O76062 418 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 TIMP2P16035 220 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 SERPINA4P29622 427 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 STIP1P31948 543 aaKnown RBP12.47□□□□□ -0.41
ACTN1-206ENST00000544964 COILP38432 576 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-206ENST00000544964 THOP1P52888 689 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 ERVPABLB-1P60509 514 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 CXADRP78310 365 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 SKOR1P84550 965 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 TRAF2Q12933 501 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 C1orf61Q13536 156 aa12.47□□□□□ -0.41
ACTN1-206ENST00000544964 NR0B2Q15466 257 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms