RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZCWPW1Q9H0M4 648 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 MFSD1Q9H3U5 465 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ZNF556Q9HAH1 456 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ZDHHC2Q9UIJ5 367 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CDV3Q9UKY7 258 aaKnown RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 DMTF1Q9Y222 760 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 AP3M1Q9Y2T2 418 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 HS3ST4Q9Y661 456 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CAPN8A6NHC0 703 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 SLC28A1O00337 649 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 SLC7A4O43246 635 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 MAP3K13O43283 966 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 SEC22BO75396 215 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 MED26O95402 600 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ASGR1P07306 291 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PIRTP0C851 137 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ETV4P43268 484 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CDH4P55283 916 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 TAF10Q12962 218 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ITGA7Q13683 1181 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 HNRNPDQ14103 355 aaKnown RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 FAM117BQ6P1L5 589 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ISLR2Q6UXK2 745 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 SLC24A5Q71RS6 500 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 LDB1Q86U70 411 aaPredicted RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS50-220ENST00000544910 C2CD4AQ8NCU7 369 aaPredicted RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 PSMG2Q969U7 264 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PRR11Q96HE9 360 aaPredicted RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 RNF145Q96MT1 663 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 OR52B2Q96RD2 323 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 MUC13Q9H3R2 512 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 OPTCQ9UBM4 332 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ZFP37Q9Y6Q3 630 aaPredicted RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 OR56A5P0C7T3 313 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 VCLP18206 1134 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 OGNP20774 298 aaKnown RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 RPS6KA3P51812 740 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 SLC7A2P52569 658 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ST8SIA6P61647 398 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 SCAPQ12770 1279 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 RALGDSQ12967 914 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PTPRNQ16849 979 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 TTC23LQ6PF05 361 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 GPRIN1Q7Z2K8 1008 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CIR1Q86X95 450 aaPredicted RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 TREML1Q86YW5 311 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CFAP52Q8N1V2 620 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 AADATQ8N5Z0 425 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 OR2T34Q8NGX1 318 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 OR2T3Q8NH03 318 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 OLFM1Q99784 485 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 MIPEPQ99797 713 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 KCNK13Q9HB14 408 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 SLC2A6Q9UGQ3 507 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PPM1HQ9ULR3 514 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 C1orf232A0A0U1RR37 186 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 SOCS7O14512 581 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 CLOCKO15516 846 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 PDE9AO76083 593 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 PGM3O95394 542 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 EOMESO95936 686 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 CKBP12277 381 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 MSX2P35548 267 aaPredicted RBP5.77□□□□□ -1.48
VPS50-220ENST00000544910 PBX3P40426 434 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 KRT33BQ14525 404 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 UPP1Q16831 310 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 C6orf52Q5T4I8 152 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 PAOXQ6QHF9 649 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 LRRC8DQ7L1W4 858 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 PDSS2Q86YH6 399 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 FAM126BQ8IXS8 530 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 PLD6Q8N2A8 252 aaKnown RBP5.77□□□□□ -1.48
VPS50-220ENST00000544910 TMEM132CQ8N3T6 1108 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 HJURPQ8NCD3 748 aaPredicted RBP5.77□□□□□ -1.48
VPS50-220ENST00000544910 SPPL2BQ8TCT7 592 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 FAM120BQ96EK7 910 aaKnown RBP5.77□□□□□ -1.48
VPS50-220ENST00000544910 ELOVL6Q9H5J4 265 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 INTS10Q9NVR2 710 aaKnown RBP5.77□□□□□ -1.48
VPS50-220ENST00000544910 MBD2Q9UBB5 411 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 ARL5AQ9Y689 179 aa5.77□□□□□ -1.48
VPS50-220ENST00000544910 DHRS12A0PJE2 317 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CLDN11O75508 207 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 SLC22A3O75751 556 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 NDST3O95803 873 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 AHSGP02765 367 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 IL4RP24394 825 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 YBEYP58557 167 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 TAS2R39P59534 338 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 BNC1Q01954 994 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TRAP1Q12931 704 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 TP53BP2Q13625 1128 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TAF1AQ15573 450 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 MTX3Q5HYI7 312 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TMEM26Q6ZUK4 368 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 FRMD7Q6ZUT3 714 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CTU1Q7Z7A3 348 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 CDH24Q86UP0 819 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CLVS1Q8IUQ0 354 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 SVOPQ8N4V2 548 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms