RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SPECC1LQ69YQ0 1117 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 TIGD7Q6NT04 549 aaPredicted RBP16.2■□□□□ 0.18
DDX55-212ENST00000544738 TEX26Q8N6G2 289 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 PCDH19Q8TAB3 1148 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 FUBP1Q96AE4 644 aaKnown RBP16.2■□□□□ 0.18
DDX55-212ENST00000544738 SCRN2Q96FV2 425 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 ZNF670Q9BS34 389 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 ADNPQ9H2P0 1102 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 WDR26Q9H7D7 661 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 AMACRQ9UHK6 382 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 LOXL2Q9Y4K0 774 aa16.2■□□□□ 0.18
DDX55-212ENST00000544738 SSU72P8A0A1W2PR75 194 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 TMEM202A6NGA9 273 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 PSMD11O00231 422 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 HEXIM1O94992 359 aaKnown RBP16.19■□□□□ 0.18
DDX55-212ENST00000544738 CELA2BP08218 269 aaPredicted RBP16.19■□□□□ 0.18
DDX55-212ENST00000544738 CD48P09326 243 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 TPM1P09493 284 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 GM2AP17900 193 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 ITIH1P19827 911 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 CCNCP24863 283 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 CASRP41180 1078 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 GARSP41250 739 aaKnown RBP16.19■□□□□ 0.18
DDX55-212ENST00000544738 ARSEP51690 589 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 MAXP61244 160 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 GALNT2Q10471 571 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 TRAF2Q12933 501 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 KCNAB2Q13303 367 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 DPYSL3Q14195 570 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 PAFAH1B3Q15102 231 aaKnown RBP16.19■□□□□ 0.18
DDX55-212ENST00000544738 IFI16Q16666 785 aaKnown RBP16.19■□□□□ 0.18
DDX55-212ENST00000544738 ANKRD20A8PQ5CZ79 823 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 BORAQ6PGQ7 559 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 USP45Q70EL2 814 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 CBARPQ8N350 705 aaPredicted RBP16.19■□□□□ 0.18
DDX55-212ENST00000544738 JPH3Q8WXH2 748 aaPredicted RBP16.19■□□□□ 0.18
DDX55-212ENST00000544738 OR1E3Q8WZA6 343 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 NUS1Q96E22 293 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 PDXPQ96GD0 296 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 DNAJC7Q99615 494 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 POLR1EQ9GZS1 481 aaKnown RBP16.19■□□□□ 0.18
DDX55-212ENST00000544738 DEF6Q9H4E7 631 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 NT5MQ9NPB1 228 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 SIRPGQ9P1W8 387 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 RABGEF1Q9UJ41 708 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 PPIL1Q9Y3C6 166 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 CENPEQ02224 2701 aa16.19■□□□□ 0.18
DDX55-212ENST00000544738 ZFC3H1O60293 1989 aaKnown RBP16.18■□□□□ 0.18
DDX55-212ENST00000544738 ITPR2Q14571 2701 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 MATN3O15232 486 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 PGLSO95336 258 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 RPLP0P05388 317 aaKnown RBP16.18■□□□□ 0.18
DDX55-212ENST00000544738 MYCLP1P12525 358 aaPredicted RBP16.18■□□□□ 0.18
DDX55-212ENST00000544738 MX2P20592 715 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 GJC1P36383 396 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 MAPK10P53779 464 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 ITKQ08881 620 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 ARHGEF7Q14155 803 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 CNGA3Q16281 694 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 ATP13A4Q4VNC1 1196 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 NCBP2-AS2Q69YL0 99 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 TAF8Q7Z7C8 310 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 KYQ8NBH2 561 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 USP7Q93009 1102 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 FATE1Q969F0 183 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 CCDC74AQ96AQ1 378 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 TMEM74Q96NL1 305 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 TSGA13Q96PP4 275 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 MCCC1Q96RQ3 725 aaPredicted RBP16.18■□□□□ 0.18
DDX55-212ENST00000544738 FGF22Q9HCT0 170 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 PHPT1Q9NRX4 125 aaPredicted RBP16.18■□□□□ 0.18
DDX55-212ENST00000544738 FOXJ2Q9P0K8 574 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 PLAAQ9Y263 795 aa16.18■□□□□ 0.18
DDX55-212ENST00000544738 D6RAR5 112 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 MFSD11O43934 449 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 AKR1B10O60218 316 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 TMEM253P0C7T8 217 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 CA4P22748 312 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 TEAD1P28347 426 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 MAN1A1P33908 653 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 ETV5P41161 510 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 POLE2P56282 527 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 TCEA2Q15560 299 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 ASTE1Q2TB18 679 aaPredicted RBP16.17■□□□□ 0.18
DDX55-212ENST00000544738 ZFYVE27Q5T4F4 411 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 DENND2CQ68D51 928 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 OGFOD3Q6PK18 319 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 GPR156Q8NFN8 814 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 MAML1Q92585 1016 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 DTD2Q96FN9 168 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 LGR4Q9BXB1 951 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 TEX101Q9BY14 249 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 CYP4F12Q9HCS2 524 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 ZNF71Q9NQZ8 489 aaPredicted RBP16.17■□□□□ 0.18
DDX55-212ENST00000544738 MOSPD1Q9UJG1 213 aa16.17■□□□□ 0.18
DDX55-212ENST00000544738 LRP4O75096 1905 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 A0A1W2PQM1 296 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 PRSS38A1L453 326 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 NPIPB15A6NHN6 443 aaPredicted RBP16.16■□□□□ 0.18
DDX55-212ENST00000544738 LHCGRP22888 699 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms