RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 AQP1P29972 269 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 PTPN9P43378 593 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 ST13P50502 369 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 CYP4F3Q08477 520 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CHST9Q7L1S5 443 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 TMPRSS11BQ86T26 416 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 PNPT1Q8TCS8 783 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 PSMG2Q969U7 264 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 SCLYQ96I15 445 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 RHOBTB2Q9BYZ6 727 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 ANGPT4Q9Y264 503 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 MED1Q15648 1581 aaPredicted RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 C3P01024 1663 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 A0A0J9YYE9 177 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 SMIM31A0A1B0GVY4 71 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 C9JVG2 144 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 MED26O95402 600 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 NMBRP28336 390 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 GDF10P55107 478 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 DAOAP59103 153 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 ZNF280AP59817 542 aaPredicted RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 TRIM71Q2Q1W2 868 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 KBTBD2Q8IY47 623 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 WRAP53Q9BUR4 548 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 VPS4AQ9UN37 437 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 U3KQV3 271 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 DHRS12A0PJE2 317 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 KCNU1A8MYU2 1149 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CACNB4O00305 520 aaPredicted RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 IPO13O94829 963 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 EPHX1P07099 455 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CYP3A5P20815 502 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 TRAF3Q13114 568 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 MTAPQ13126 283 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 SNAP47Q5SQN1 464 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CLEC6AQ6EIG7 209 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CDC73Q6P1J9 531 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CEP44Q9C0F1 390 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 ZNF490Q9ULM2 529 aaPredicted RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 SULT2A1Q06520 285 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 COX10Q12887 443 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 ZBTB46Q86UZ6 589 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CACTIN-AS1Q8N1I8 211 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 ASZ1Q8WWH4 475 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CLP1Q92989 425 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 SGK2Q9HBY8 427 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 TOR4AQ9NXH8 423 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 SAMHD1Q9Y3Z3 626 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 ARIH1Q9Y4X5 557 aaPredicted RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 SCAMP1O15126 338 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 FFAR2O15552 330 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CCNCP24863 283 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 BUD31P41223 144 aaPredicted RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 ASPAP45381 313 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 PSMD8P48556 350 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 SEMG2Q02383 582 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 KRR1Q13601 381 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 DDI2Q5TDH0 399 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 PPM1MQ96MI6 270 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CPQQ9Y646 472 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 RICTORQ6R327 1708 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 PLIN4Q96Q06 1357 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 CDC42P60953 191 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 ZNF460Q14592 562 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 CBX2Q14781 532 aaPredicted RBP12.77□□□□□ -0.36
CHD4-211ENST00000544484 CCDC92Q53HC0 331 aaPredicted RBP12.77□□□□□ -0.36
CHD4-211ENST00000544484 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 FZD8Q9H461 694 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 PPIEQ9UNP9 301 aaKnown RBP12.77□□□□□ -0.36
CHD4-211ENST00000544484 SLC27A6Q9Y2P4 619 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 FGBP02675 491 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 L1CAMP32004 1257 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 GSTM5P46439 218 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 YBEYP58557 167 aaPredicted RBP12.77□□□□□ -0.36
CHD4-211ENST00000544484 C11orf88Q6PI97 169 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 NPAS4Q8IUM7 802 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 KLHL23Q8NBE8 558 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 IRGQQ8WZA9 623 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 ZNF516Q92618 1163 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 CLPTM1LQ96KA5 538 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 IKZF3Q9UKT9 509 aa12.77□□□□□ -0.36
CHD4-211ENST00000544484 H3BM21 787 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 NFKBIEO00221 500 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 CYP4B1P13584 511 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 CHN2P52757 468 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 SPIBQ01892 262 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 PDK3Q15120 406 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 TTC23Q5W5X9 447 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 DEF8Q6ZN54 512 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 PPCDCQ96CD2 204 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 HSD3B7Q9H2F3 369 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 TBC1D30Q9Y2I9 924 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 OR10H3O60404 316 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 NRP2O60462 931 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 RNASEH2AO75792 299 aaKnown RBP12.77□□□□□ -0.37
CHD4-211ENST00000544484 CAPN15O75808 1086 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms