RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 PLEKHG1Q9ULL1 1385 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 SCAMP1O15126 338 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 HS6ST1O60243 411 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 TOM1O60784 492 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 DKC1O60832 514 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCFD1-207ENST00000544052 HOXB5P09067 269 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 PPP5CP53041 499 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 ELLP55199 621 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-207ENST00000544052 ID2Q02363 134 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 PCLAFQ15004 111 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 NAB2Q15742 525 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 FAM133BQ5BKY9 247 aaKnown RBP3.81□□□□□ -1.8
SCFD1-207ENST00000544052 EPHA10Q5JZY3 1008 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 GARNL3Q5VVW2 1013 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 PMS2CLQ68D20 193 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 NAA16Q6N069 864 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-207ENST00000544052 CFAP77Q6ZQR2 320 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 KRT74Q7RTS7 529 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 YTHDF3Q7Z739 585 aaKnown RBP3.81□□□□□ -1.8
SCFD1-207ENST00000544052 RBFAQ8N0V3 343 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 IGSF8Q969P0 613 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 ERGIC1Q969X5 290 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 FBXL8Q96CD0 374 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 PGAM5Q96HS1 289 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM68Q96MH6 324 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 NCAPGQ9BPX3 1015 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 WDR77Q9BQA1 342 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-207ENST00000544052 CISD1Q9NZ45 108 aaKnown RBP3.81□□□□□ -1.8
SCFD1-207ENST00000544052 NFE2L3Q9Y4A8 694 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 AHDC1Q5TGY3 1603 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-207ENST00000544052 TRPM2O94759 1503 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 KANK1Q14678 1352 aa3.81□□□□□ -1.8
SCFD1-207ENST00000544052 FAM135BQ49AJ0 1406 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 HCRTR2O43614 444 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 TLR2O60603 784 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ATG13O75143 517 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 BCAR3O75815 825 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 NUDT3O95989 172 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 CBSLP0DN79 551 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SAT1P21673 171 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 CBSP35520 551 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 AVPR1AP37288 418 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 RRP1P56182 461 aaKnown RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 POU5F1Q01860 360 aaKnown RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 FAM27E3Q08E93 113 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SLC10A2Q12908 348 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 CDC16Q13042 620 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 NAE1Q13564 534 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 C6orf141Q5SZD1 244 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 STRIP1Q5VSL9 837 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 NUGGCQ68CJ6 796 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SLC18B1Q6NT16 456 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SEPT14Q6ZU15 432 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ZBTB8BQ8NAP8 495 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SLC44A5Q8NCS7 719 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM18Q96B42 140 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 CHFRQ96EP1 664 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 GCNAQ96QF7 691 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 GAD1Q99259 594 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 PAFAH2Q99487 392 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM47Q9BQJ4 181 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 APOL6Q9BWW8 343 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 LTB4R2Q9NPC1 389 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 CYSLTR2Q9NS75 346 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ANKRD10Q9NXR5 420 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 WSB2Q9NYS7 404 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 BCCIPQ9P287 314 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 LAMC1P11047 1609 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 RRBP1Q9P2E9 1410 aaKnown RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 CDRT15L2A8MXV6 281 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 KCNU1A8MYU2 1149 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ZNF814B7Z6K7 855 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 UBE2CO00762 179 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 TLX3O43711 291 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 APOA4P06727 396 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SRPRAP08240 638 aaKnown RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ENO3P13929 434 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 GLULP15104 373 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ANXA7P20073 488 aaKnown RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 CDH12P55289 794 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 UBXN2AP68543 259 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 PRPF4BQ13523 1007 aaKnown RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SHBQ15464 509 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ANKRD54Q6NXT1 300 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SLC2A7Q6PXP3 512 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 RD3Q7Z3Z2 195 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 KRT77Q7Z794 578 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 MB21D2Q8IYB1 491 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ENGASEQ8NFI3 743 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 BEST2Q8NFU1 509 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM174Q8WUU8 243 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ZNF333Q96JL9 665 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 SLC41A2Q96JW4 573 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 BAG1Q99933 345 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 FAM110AQ9BQ89 295 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 MSTO1Q9BUK6 570 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 TEX12Q9BXU0 123 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 KLHL31Q9H511 634 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 GPR108Q9NPR9 543 aa3.8□□□□□ -1.8
SCFD1-207ENST00000544052 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms