RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PMF1Q6P1K2 205 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 PKP2Q99959 881 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 TOR1BO14657 336 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 SMIM10L2AP0DMW4 78 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 SMIM10L2BP0DMW5 78 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 SRP54P61011 504 aaKnown RBP19.34■□□□□ 0.69
SUDS3-204ENST00000543473 ASRGL1Q7L266 308 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 OTOP3Q7RTS5 596 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 PHTF2Q8N3S3 785 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 KLHL32Q96NJ5 620 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 LIN28AQ9H9Z2 209 aaKnown RBP19.34■□□□□ 0.69
SUDS3-204ENST00000543473 KRCC1Q9NPI7 259 aaPredicted RBP19.34■□□□□ 0.69
SUDS3-204ENST00000543473 BTBD19C9JJ37 291 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 ALDH2P05091 517 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 ANXA5P08758 320 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 IL1R2P27930 398 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 GRK3P35626 688 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 ALDH9A1P49189 494 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 TRIM71Q2Q1W2 868 aaKnown RBP19.34■□□□□ 0.69
SUDS3-204ENST00000543473 TREML1Q86YW5 311 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 LGI2Q8N0V4 545 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 LENG9Q96B70 501 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 KLHL1Q9NR64 748 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 TIMM22Q9Y584 194 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 EI24O14681 340 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 PAICSP22234 425 aaKnown RBP19.33■□□□□ 0.69
SUDS3-204ENST00000543473 PYDC2Q56P42 97 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 TLDC1Q6P9B6 456 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 MYLPFQ96A32 169 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 CD320Q9NPF0 282 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 AAASQ9NRG9 546 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 WRAP73Q9P2S5 460 aaPredicted RBP19.33■□□□□ 0.69
SUDS3-204ENST00000543473 POLR3HQ9Y535 204 aaPredicted RBP19.33■□□□□ 0.69
SUDS3-204ENST00000543473 ZNF142P52746 1687 aaPredicted RBP19.33■□□□□ 0.69
SUDS3-204ENST00000543473 STX16-NPEPL1H3BU86 382 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 CLDN5O00501 218 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 OR6B1O95007 311 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 FEN1P39748 380 aaKnown RBP19.33■□□□□ 0.69
SUDS3-204ENST00000543473 TTPAP49638 278 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 STARD3Q14849 445 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 GPR158Q5T848 1215 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 LRRC52Q8N7C0 313 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 C18orf25Q96B23 403 aaPredicted RBP19.33■□□□□ 0.69
SUDS3-204ENST00000543473 CLCA2Q9UQC9 943 aa19.33■□□□□ 0.69
SUDS3-204ENST00000543473 RGPD2P0DJD1 1756 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 H7C4K7 107 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 AGRPO00253 132 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 LRIG2O94898 1065 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 SERPINA1P01009 418 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 OLR1P78380 273 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 ZNF280DQ6N043 979 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 C11orf88Q6PI97 169 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 ANKRD23Q86SG2 305 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 CACTIN-AS1Q8N1I8 211 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 MPP5Q8N3R9 675 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 CAMKK1Q8N5S9 505 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 C1orf127Q8N9H9 656 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 CMASQ8NFW8 434 aaPredicted RBP19.33■□□□□ 0.68
SUDS3-204ENST00000543473 SLC17A6Q9P2U8 582 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 SNX6Q9UNH7 406 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 NCK1P16333 377 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 IGFBP5P24593 272 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 AIF1P55008 147 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 IRF8Q02556 426 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 ENPEPQ07075 957 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 ZNF284Q2VY69 593 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 ADAMTSL2Q86TH1 951 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 DPP10Q8N608 796 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 ZBTB8BQ8NAP8 495 aaPredicted RBP19.33■□□□□ 0.68
SUDS3-204ENST00000543473 CANT1Q8WVQ1 401 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 ELMO1Q92556 727 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 NTPCRQ9BSD7 190 aaKnown RBP19.33■□□□□ 0.68
SUDS3-204ENST00000543473 CNTN6Q9UQ52 1028 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 TEX264Q9Y6I9 313 aa19.33■□□□□ 0.68
SUDS3-204ENST00000543473 IFRD1O00458 451 aaPredicted RBP19.32■□□□□ 0.68
SUDS3-204ENST00000543473 RFXANKO14593 260 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 NPHS1O60500 1241 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 HPCAL1P37235 193 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 AFTPHQ6ULP2 937 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 PANX1Q96RD7 426 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 ADAM2Q99965 735 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 ADAM7Q9H2U9 754 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 TRPM5Q9NZQ8 1165 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 UXTQ9UBK9 157 aaPredicted RBP19.32■□□□□ 0.68
SUDS3-204ENST00000543473 ZNHIT2Q9UHR6 403 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 SLC28A1O00337 649 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 HAT1O14929 419 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 HOXC6P09630 235 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 PBLDP30039 288 aaPredicted RBP19.32■□□□□ 0.68
SUDS3-204ENST00000543473 BNC1Q01954 994 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 PRKCQQ04759 706 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 HERC3Q15034 1050 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 RETSATQ6NUM9 610 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 TDRD1Q9BXT4 1180 aaKnown RBP19.32■□□□□ 0.68
SUDS3-204ENST00000543473 DUSP16Q9BY84 665 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 MYH8P13535 1937 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 RNASEH1O60930 286 aaKnown RBP19.32■□□□□ 0.68
SUDS3-204ENST00000543473 CFHP08603 1231 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 MBL2P11226 248 aaPredicted RBP19.32■□□□□ 0.68
SUDS3-204ENST00000543473 HOXB6P17509 224 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms