RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ZSWIM9Q86XI8 627 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 CILP2Q8IUL8 1156 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 NDUFAF2Q8N183 169 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 TTC30BQ8N4P2 665 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 UCMAQ8WVF2 138 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 SPOCK2Q92563 424 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 ECHDC3Q96DC8 303 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 SRPK1Q96SB4 655 aaKnown RBP8.68□□□□□ -1.02
THBS3-210ENST00000541576 IQCGQ9H095 443 aaKnown RBP8.68□□□□□ -1.02
THBS3-210ENST00000541576 CAB39LQ9H9S4 337 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 BATF3Q9NR55 127 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 POLR3BQ9NW08 1133 aaPredicted RBP8.68□□□□□ -1.02
THBS3-210ENST00000541576 PHTF1Q9UMS5 762 aa8.68□□□□□ -1.02
THBS3-210ENST00000541576 WDR91A4D1P6 747 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 TM9SF1O15321 606 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 CCND1P24385 295 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 TYK2P29597 1187 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 EIF2DP41214 584 aaKnown RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 ETV4P43268 484 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 SERPINB8P50452 374 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 PDE1CQ14123 709 aaPredicted RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 ZNF789Q5FWF6 425 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 MRNIPQ6NTE8 343 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 GDPD4Q6W3E5 623 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 LYSMD3Q7Z3D4 306 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 LDB1Q86U70 411 aaPredicted RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 PHTF2Q8N3S3 785 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 OR4L1Q8NH43 312 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 ACMSDQ8TDX5 336 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 ERP27Q96DN0 273 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 MTG2Q9H4K7 406 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 BRD9Q9H8M2 597 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 FBXO6Q9NRD1 293 aaPredicted RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 MARCH4Q9P2E8 410 aaPredicted RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 PKP3Q9Y446 797 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 A0A1W2PQ67 120 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 CAPN8A6NHC0 703 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 SRRM3A6NNA2 597 aaPredicted RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 CD3EAPO15446 510 aaKnown RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 HAUS5O94927 633 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 UBTFL6P0CB48 400 aaPredicted RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 ZCCHC18P0CG32 403 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 ETS2P15036 469 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 PSMA3P25788 255 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 HNF1BP35680 557 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 HMGCLP35914 325 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 HADHAP40939 763 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 COL4A3Q01955 1670 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 HTR4Q13639 388 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 FNDC3BQ53EP0 1204 aaKnown RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 AFTPHQ6ULP2 937 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 SPNS2Q8IVW8 549 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 ZNF366Q8N895 744 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 KDM1BQ8NB78 822 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 ISL2Q96A47 359 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 KLHL32Q96NJ5 620 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 FAM111AQ96PZ2 611 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 GPR22Q99680 433 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 ZFYVE1Q9HBF4 777 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 BPIFA1Q9NP55 256 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 SNX15Q9NRS6 342 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 CATSPERZQ9NTU4 200 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 SLC12A4Q9UP95 1085 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 WASF2Q9Y6W5 498 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 C1orf232A0A0U1RR37 186 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 ARNTLO00327 626 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 SOX1O00570 391 aaPredicted RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 SNX3O60493 162 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 LEFTY1O75610 366 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 KAT7O95251 611 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 CBX6O95503 412 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 LEPRP48357 1165 aaKnown RBP8.67□□□□□ -1.02
THBS3-210ENST00000541576 RPS6KA3P51812 740 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 HHATQ5VTY9 493 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 USP45Q70EL2 814 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 GALNT7Q86SF2 657 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 GPR150Q8NGU9 434 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 B4GALNT2Q8NHY0 566 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 EID2BQ96D98 161 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 SCRN2Q96FV2 425 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 LYSMD1Q96S90 227 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 MKS1Q9NXB0 559 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 IL17CQ9P0M4 197 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 KLHL14Q9P2G3 628 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 IL36AQ9UHA7 158 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 FKBPLQ9UIM3 349 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 SLC39A10Q9ULF5 831 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 PLLPQ9Y342 182 aa8.67□□□□□ -1.02
THBS3-210ENST00000541576 KIAA1549LQ6ZVL6 1849 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 ANHXE9PGG2 379 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 DHRS4L1P0CG22 281 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 TAC1P20366 129 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 CRHR1P34998 444 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 GRIA2P42262 883 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 MAGEA12P43365 314 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 POLR2LP62875 67 aaKnown RBP8.66□□□□□ -1.02
THBS3-210ENST00000541576 IL9RQ01113 521 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 MLLT1Q03111 559 aaPredicted RBP8.66□□□□□ -1.02
THBS3-210ENST00000541576 RCN2Q14257 317 aa8.66□□□□□ -1.02
THBS3-210ENST00000541576 FASTKD1Q53R41 847 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms