RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	AP2M1	Q96CW1	435 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	EID2B	Q96D98	161 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
POLE-215	ENST00000540987	DEPDC7	Q96QD5	511 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	CCDC3	Q9BQI4	270 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	RIOK2	Q9BVS4	552 aa	Known RBP	13.59	□□□□□ -0.23
POLE-215	ENST00000540987	NRSN2	Q9GZP1	204 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	SLC25A51	Q9H1U9	297 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	CARS2	Q9HA77	564 aa	Known RBP	13.59	□□□□□ -0.23
POLE-215	ENST00000540987	GLOD4	Q9HC38	313 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	LUC7L	Q9NQ29	371 aa	Known RBP	13.59	□□□□□ -0.23
POLE-215	ENST00000540987	GULP1	Q9UBP9	304 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	RALY	Q9UKM9	306 aa	Known RBP	13.59	□□□□□ -0.23
POLE-215	ENST00000540987	DNPEP	Q9ULA0	475 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	SUFU	Q9UMX1	484 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	SLC17A4	Q9Y2C5	497 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	ST14	Q9Y5Y6	855 aa		13.59	□□□□□ -0.23
POLE-215	ENST00000540987	DSP	P15924	2871 aa	Known RBP	13.58	□□□□□ -0.23
POLE-215	ENST00000540987	ITPR1	Q14643	2758 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	C1orf232	A0A0U1RR37	186 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987		A0A1W2PNU3	283 aa	Predicted RBP	13.58	□□□□□ -0.24
POLE-215	ENST00000540987	BTNL10	A8MVZ5	291 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987		B4DGG1	531 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	BRINP1	O60477	761 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	MT-CYB	P00156	380 aa	Predicted RBP	13.58	□□□□□ -0.24
POLE-215	ENST00000540987	PIRT	P0C851	137 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	CTNNA1	P35221	906 aa	Known RBP	13.58	□□□□□ -0.24
POLE-215	ENST00000540987	GPR1	P46091	355 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	GNPDA1	P46926	289 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	NR2C2	P49116	596 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	VAV2	P52735	878 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	SLC14A2	Q15849	920 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	PPP2R5E	Q16537	467 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	PCSK7	Q16549	785 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	TEX44	Q53QW1	395 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	BBS12	Q6ZW61	710 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	LYSMD3	Q7Z3D4	306 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	TAF8	Q7Z7C8	310 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	NT5DC3	Q86UY8	548 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	CCDC50	Q8IVM0	306 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	SDR16C5	Q8N3Y7	309 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	LRRC57	Q8N9N7	239 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	EXD1	Q8NHP7	514 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	TFB1M	Q8WVM0	346 aa	Known RBP	13.58	□□□□□ -0.24
POLE-215	ENST00000540987	COX14	Q96I36	57 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	RBM41	Q96IZ5	413 aa	Known RBP	13.58	□□□□□ -0.24
POLE-215	ENST00000540987	TMEM98	Q9Y2Y6	226 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	GPSM3	Q9Y4H4	160 aa		13.58	□□□□□ -0.24
POLE-215	ENST00000540987	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	PMS2P1	A4D2B8	440 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	GRID2IP	A4D2P6	1211 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	FADS2P1	A8MWK0	482 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	ANKRD66	B4E2M5	251 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987		F5H423	210 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	PDE2A	O00408	941 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	NTN3	O00634	580 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	INPP4B	O15327	924 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	PJA2	O43164	708 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	IVL	P07476	585 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	NFKB1	P19838	968 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	CTNNA2	P26232	953 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	AK4	P27144	223 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	CDC25B	P30305	580 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	SPINT3	P49223	89 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	NOMO1	Q15155	1222 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	ISX	Q2M1V0	245 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	HENMT1	Q5T8I9	393 aa	Known RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	OGFOD3	Q6PK18	319 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	KDELC1	Q6UW63	502 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	KDELC2	Q7Z4H8	507 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	ZC3H18	Q86VM9	953 aa	Known RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	RCOR2	Q8IZ40	523 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	NRSN1	Q8IZ57	195 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	FAM46D	Q8NEK8	389 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	GPBAR1	Q8TDU6	330 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	SCG3	Q8WXD2	468 aa	Known RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	ALG3	Q92685	438 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	SCARF2	Q96GP6	870 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	TEKT5	Q96M29	485 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	BAG1	Q99933	345 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	DESI2	Q9BSY9	194 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	MLPH	Q9BV36	600 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	HEMGN	Q9BXL5	484 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	ABCG4	Q9H172	646 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	SYNDIG1	Q9H7V2	258 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	C10orf88	Q9H8K7	445 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	UBP1	Q9NZI7	540 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	TRIM10	Q9UDY6	481 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	CNOT6	Q9ULM6	557 aa	Known RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	ZNF711	Q9Y462	761 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	PLEKHM1	Q9Y4G2	1056 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	OAS3	Q9Y6K5	1087 aa	Known RBP	13.57	□□□□□ -0.24
POLE-215	ENST00000540987	AK5	Q9Y6K8	562 aa		13.57	□□□□□ -0.24
POLE-215	ENST00000540987	FAM208B	Q5VWN6	2430 aa		13.56	□□□□□ -0.24
POLE-215	ENST00000540987	USP12	O75317	370 aa		13.56	□□□□□ -0.24
POLE-215	ENST00000540987	PMPCB	O75439	489 aa		13.56	□□□□□ -0.24
POLE-215	ENST00000540987	MAZ	P56270	477 aa	Known RBP	13.56	□□□□□ -0.24

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