RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 HSP90AB4PQ58FF6 505 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 GPATCH4Q5T3I0 446 aaKnown RBP5.93□□□□□ -1.46
YBX3-210ENST00000540975 TSSK4Q6SA08 328 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 FOXL2NBQ6ZUU3 175 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 TMEM219Q86XT9 240 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 RNF113BQ8IZP6 322 aaKnown RBP5.93□□□□□ -1.46
YBX3-210ENST00000540975 KCNH5Q8NCM2 988 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 SPATA3Q8NHX4 192 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 RFFLQ8WZ73 363 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 CDCA5Q96FF9 252 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 MTERF1Q99551 399 aaKnown RBP5.93□□□□□ -1.46
YBX3-210ENST00000540975 PIP5K1AQ99755 562 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 VPS33BQ9H267 617 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 TCF7L2Q9NQB0 619 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 TXLNGQ9NUQ3 528 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 ABI3Q9P2A4 366 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 POU2F3Q9UKI9 436 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 PADI1Q9ULC6 663 aa5.93□□□□□ -1.46
YBX3-210ENST00000540975 CCDC189A1A4V9 331 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 LILRA5A6NI73 299 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 VCYO14598 125 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 HLA-DOBP13765 273 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 ZNF182P17025 639 aaPredicted RBP5.92□□□□□ -1.46
YBX3-210ENST00000540975 RARSP54136 660 aaKnown RBP5.92□□□□□ -1.46
YBX3-210ENST00000540975 RPL7AP62424 266 aaKnown RBP5.92□□□□□ -1.46
YBX3-210ENST00000540975 CXorf66Q5JRM2 361 aaPredicted RBP5.92□□□□□ -1.46
YBX3-210ENST00000540975 TRNP1Q6NT89 227 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 DSTYKQ6XUX3 929 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 C1orf87Q8N0U7 546 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 BEST3Q8N1M1 668 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 NAXEQ8NCW5 288 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 IGSF8Q969P0 613 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 GRAMD2BQ96HH9 432 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 FEM1CQ96JP0 617 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 TMEM68Q96MH6 324 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 PPM1MQ96MI6 270 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 NODALQ96S42 347 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 CSTL1Q9H114 145 aa5.92□□□□□ -1.46
YBX3-210ENST00000540975 ACSS1Q9NUB1 689 aaPredicted RBP5.92□□□□□ -1.46
YBX3-210ENST00000540975 CNOT8Q9UFF9 292 aaKnown RBP5.92□□□□□ -1.46
YBX3-210ENST00000540975 A0A1W2PRG0 241 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 CREB3O43889 395 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 XPNPEP2O43895 674 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 PAGE4O60829 102 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 CDH1P12830 882 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 IL7RP16871 459 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 CORO1AP31146 461 aaKnown RBP5.91□□□□□ -1.46
YBX3-210ENST00000540975 CSNK2A1P68400 391 aaPredicted RBP5.91□□□□□ -1.46
YBX3-210ENST00000540975 DCTN2Q13561 401 aaKnown RBP5.91□□□□□ -1.46
YBX3-210ENST00000540975 ZNF628Q5EBL2 1059 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 USP43Q70EL4 1123 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 SMIM29Q86T20 159 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 DIS3L2Q8IYB7 885 aaKnown RBP5.91□□□□□ -1.46
YBX3-210ENST00000540975 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.91□□□□□ -1.46
YBX3-210ENST00000540975 PCDH20Q8N6Y1 951 aaKnown RBP5.91□□□□□ -1.46
YBX3-210ENST00000540975 PCYOX1LQ8NBM8 494 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 CSNK2A3Q8NEV1 391 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 OR14L1PQ8NHC6 308 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 INTS12Q96CB8 462 aaKnown RBP5.91□□□□□ -1.46
YBX3-210ENST00000540975 RHBDF1Q96CC6 855 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 ORAI1Q96D31 301 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 MAP7D2Q96T17 732 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 ACOX2Q99424 681 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 PCYT2Q99447 389 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 STRA6Q9BX79 667 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 KLHL1Q9NR64 748 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 RALYQ9UKM9 306 aaKnown RBP5.91□□□□□ -1.46
YBX3-210ENST00000540975 AMDHD2Q9Y303 409 aa5.91□□□□□ -1.46
YBX3-210ENST00000540975 ASPDHA6ND91 283 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 LMX1BO60663 402 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 EGFP01133 1207 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 ELF1P32519 619 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 IL15P40933 162 aaPredicted RBP5.9□□□□□ -1.46
YBX3-210ENST00000540975 OLR1P78380 273 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 FOXM1Q08050 763 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 TBX2Q13207 712 aaPredicted RBP5.9□□□□□ -1.46
YBX3-210ENST00000540975 FRG1Q14331 258 aaKnown RBP5.9□□□□□ -1.46
YBX3-210ENST00000540975 KRTAP24-1Q3LI83 254 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 DPCR1Q3MIW9 517 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 IRAK1BP1Q5VVH5 260 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 CACNA2D4Q7Z3S7 1137 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 KMT5CQ86Y97 462 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 KCNG4Q8TDN1 519 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 APBB2Q92870 758 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 MMABQ96EY8 250 aaPredicted RBP5.9□□□□□ -1.46
YBX3-210ENST00000540975 EPYCQ99645 322 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 PCGF1Q9BSM1 259 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 SLC26A6Q9BXS9 759 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 PLEKHA5Q9HAU0 1116 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 SEBOXQ9HB31 216 aaPredicted RBP5.9□□□□□ -1.46
YBX3-210ENST00000540975 SCPEP1Q9HB40 452 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 SDF2L1Q9HCN8 221 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 LTB4R2Q9NPC1 389 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 DLGAP2Q9P1A6 1054 aa5.9□□□□□ -1.46
YBX3-210ENST00000540975 A0A0B4J293 547 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 A0A1W2PS18 150 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 SPINT2O43291 252 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 KRT86O43790 486 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 NKX2-2O95096 273 aa5.89□□□□□ -1.47
YBX3-210ENST00000540975 SPARCP09486 303 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms