RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 FKBP6O75344 327 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 SLC4A1P02730 911 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 PABPC1LQ4VXU2 614 aaKnown RBP13.74□□□□□ -0.21
RTN3-210ENST00000540798 PPM1LQ5SGD2 360 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 THEMIS2Q5TEJ8 643 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 LINGO4Q6UY18 593 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 CYHR1Q6ZMK1 362 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 ADGRG6Q86SQ4 1221 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 FBXW8Q8N3Y1 598 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 SPDYE1Q8NFV5 336 aaPredicted RBP13.74□□□□□ -0.21
RTN3-210ENST00000540798 PHF21BQ96EK2 531 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 CATSPER2Q96P56 530 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 SH3GL3Q99963 347 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 LRRC3Q9BY71 257 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 GTSE1Q9NYZ3 720 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 ASB3Q9Y575 518 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 H0Y626 953 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 PMLP29590 882 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 PLK1P53350 603 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 LRRC74BQ6ZQY2 392 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 RPS27LQ71UM5 84 aaKnown RBP13.74□□□□□ -0.21
RTN3-210ENST00000540798 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 CARNMT1Q8N4J0 409 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 ARL14EPQ8N8R7 260 aaPredicted RBP13.74□□□□□ -0.21
RTN3-210ENST00000540798 MAB21L3Q8N8X9 362 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 DCAF4L2Q8NA75 395 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 WFDC5Q8TCV5 224 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 KIAA1191Q96A73 305 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 MRPL17Q9NRX2 175 aaKnown RBP13.74□□□□□ -0.21
RTN3-210ENST00000540798 MRGBPQ9NV56 204 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 NMRK1Q9NWW6 199 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 VPS51Q9UID3 782 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 PRPF19Q9UMS4 504 aaKnown RBP13.74□□□□□ -0.21
RTN3-210ENST00000540798 ATP11BQ9Y2G3 1177 aa13.74□□□□□ -0.21
RTN3-210ENST00000540798 LCHNA4D1U4 455 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 SMIM24O75264 130 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 ANPEPP15144 967 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 ITGB8P26012 769 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 ADARP55265 1226 aaKnown RBP13.73□□□□□ -0.21
RTN3-210ENST00000540798 TBL3Q12788 808 aaKnown RBP13.73□□□□□ -0.21
RTN3-210ENST00000540798 CYLC2Q14093 348 aaPredicted RBP13.73□□□□□ -0.21
RTN3-210ENST00000540798 CCNIQ14094 377 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 UGT3A2Q3SY77 523 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 TRIM74Q86UV6 250 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 TRIM73Q86UV7 250 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 TMC8Q8IU68 726 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 AFAP1L2Q8N4X5 818 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 NAF1Q96HR8 494 aaKnown RBP13.73□□□□□ -0.21
RTN3-210ENST00000540798 SYTL2Q9HCH5 934 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 HACD3Q9P035 362 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 VPS9D1Q9Y2B5 631 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 CPQQ9Y646 472 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 WASF2Q9Y6W5 498 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 KERAO60938 352 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 ACADSP16219 412 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 ATP6V1C1P21283 382 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 CSKP41240 450 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 CLCN4P51793 760 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 CREMQ03060 361 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
RTN3-210ENST00000540798 TAF11Q15544 211 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 C1QTNF12Q5T7M4 302 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 TXNDC8Q6A555 127 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 CPXM2Q8N436 756 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 HMGCLL1Q8TB92 370 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 ASB2Q96Q27 587 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 C19orf43Q9BQ61 176 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 ZBP1Q9H171 429 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 TAS2R13Q9NYV9 303 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 ANGPTL2Q9UKU9 493 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 TRAF6Q9Y4K3 522 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 FGF4P08620 206 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 SLC7A9P82251 487 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 XIAPP98170 497 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 PTK2BQ14289 1009 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 CCDC6Q16204 474 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 PSAPL1Q6NUJ1 521 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 HTR3DQ70Z44 454 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 PIANPQ8IYJ0 282 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 KYQ8NBH2 561 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 JADE3Q92613 823 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 TMA16Q96EY4 203 aaKnown RBP13.73□□□□□ -0.21
RTN3-210ENST00000540798 STK39Q9UEW8 545 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 FKBPLQ9UIM3 349 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 POMPQ9Y244 141 aa13.73□□□□□ -0.21
RTN3-210ENST00000540798 NVLO15381 856 aaKnown RBP13.72□□□□□ -0.21
RTN3-210ENST00000540798 KLK8O60259 260 aa13.72□□□□□ -0.21
RTN3-210ENST00000540798 EFCAB14O75071 495 aa13.72□□□□□ -0.21
RTN3-210ENST00000540798 SORBS2O94875 1100 aaKnown RBP13.72□□□□□ -0.21
RTN3-210ENST00000540798 HDCP19113 662 aa13.72□□□□□ -0.21
RTN3-210ENST00000540798 PPM1AP35813 382 aa13.72□□□□□ -0.21
RTN3-210ENST00000540798 CDKN1CP49918 316 aaPredicted RBP13.72□□□□□ -0.21
RTN3-210ENST00000540798 RPS6KA3P51812 740 aa13.72□□□□□ -0.21
RTN3-210ENST00000540798 ATP6V0D1P61421 351 aa13.72□□□□□ -0.21
RTN3-210ENST00000540798 AP2B1P63010 937 aa13.72□□□□□ -0.21
RTN3-210ENST00000540798 CTSL3PQ5NE16 218 aa13.72□□□□□ -0.21
RTN3-210ENST00000540798 C16orf89Q6UX73 402 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms