RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	BORA	Q6PGQ7	559 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PGAM4	Q8N0Y7	254 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HTR3C	Q8WXA8	447 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KCTD13	Q8WZ19	329 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NDRG1	Q92597	394 aa	Known RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SMARCD2	Q92925	531 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ACD	Q96AP0	544 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MFSD3	Q96ES6	412 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PHF7	Q9BWX1	381 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAM96A	Q9H5X1	160 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SOX17	Q9H6I2	414 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SP110	Q9HB58	689 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MARCH5	Q9NX47	278 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DTL	Q9NZJ0	730 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AURKC	Q9UQB9	309 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MGAM	O43451	1857 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CROCC	Q5TZA2	2017 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TCAF2	A6NFQ2	919 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MTSS1	O43312	755 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GCAT	O75600	419 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	POU2F2	P09086	479 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HTR7	P34969	479 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NME5	P56597	212 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RELA	Q04206	551 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRSF1	Q12849	480 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LRRC8E	Q6NSJ5	796 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C16orf87	Q6PH81	154 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TMEM26	Q6ZUK4	368 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C16orf59	Q7L2K0	433 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GPR149	Q86SP6	731 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LZTR1	Q8N653	840 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DNAAF3	Q8N9W5	541 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CERS2	Q96G23	380 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MUC3B	Q9H195	1237 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IRF2BPL	Q9H1B7	796 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	UBP1	Q9NZI7	540 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CCDC167	Q9P0B6	97 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DEC1	Q9P2X7	70 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SCML2	Q9UQR0	700 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PARP14	Q460N5	1801 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LCHN	A4D1U4	455 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PABPN1L	A6NDY0	278 aa	Known RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		C9JVG2	144 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RNF103	O00237	685 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PFDN6	O15212	129 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HTRA2	O43464	458 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HCRT	O43612	131 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FUCA1	P04066	466 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OCM2	P0CE71	109 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OCM	P0CE72	109 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EPCAM	P16422	314 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PGAM1	P18669	254 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TPSB2	P20231	275 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GARS	P41250	739 aa	Known RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MAGEA6	P43360	314 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HSPA13	P48723	471 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ESRRG	P62508	458 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SEMA5A	Q13591	1074 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PDK2	Q15119	407 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TPSAB1	Q15661	275 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	STXBP5	Q5T5C0	1151 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HMBOX1	Q6NT76	420 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TTC33	Q6PID6	262 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RNF19B	Q6ZMZ0	732 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PID1	Q7Z2X4	250 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CARM1	Q86X55	608 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAM131B	Q86XD5	332 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OFCC1	Q8IZS5	231 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CCDC185	Q8N715	623 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NAT16	Q8N8M0	369 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PNPLA1	Q8N8W4	532 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KCTD4	Q8WVF5	259 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PSMG2	Q969U7	264 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLCO4A1	Q96BD0	722 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	B3GALT6	Q96L58	329 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ACE2	Q9BYF1	805 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRIM8	Q9BZR9	551 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IARS2	Q9NSE4	1012 aa	Known RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TDP1	Q9NUW8	608 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRNAU1AP	Q9NX07	287 aa	Known RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DUS2	Q9NX74	493 aa	Known RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GMIP	Q9P107	970 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CFAP97	Q9P2B7	532 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDYL	Q9Y232	598 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	COQ6	Q9Y2Z9	468 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RLF	Q13129	1914 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PRORSD1P	A6NEY8	169 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NEMP2	A6NFY4	417 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		K7EPI3	171 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RHOC	P08134	193 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	UGT1A1	P22309	533 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	UGT1A4	P22310	534 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	UGT1A3	P35503	534 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	UGT1A5	P35504	534 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C21orf59	P57076	290 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NUP107	P57740	925 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ERVFC1	P60507	584 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ITK	Q08881	620 aa		5.66	□□□□□ -1.5

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