RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SLC14A1Q13336 389 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 MTM1Q13496 603 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 TPSAB1Q15661 275 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
UBC-208ENST00000540700 C4orf22Q6V702 233 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 SYDE1Q6ZW31 735 aaPredicted RBP16.69■□□□□ 0.26
UBC-208ENST00000540700 CTAGE6Q86UF2 777 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 CAND1Q86VP6 1230 aaKnown RBP16.69■□□□□ 0.26
UBC-208ENST00000540700 HORMAD1Q86X24 394 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 CTAGE4Q8IX94 777 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 AGGF1Q8N302 714 aaeCLIP16.69■□□□□ 0.26
UBC-208ENST00000540700 CADM4Q8NFZ8 388 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 CXorf40AQ8TE69 158 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 PPP1R2P1Q96PQ5 205 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 FZD3Q9NPG1 666 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 APOBEC2Q9Y235 224 aaKnown RBP16.69■□□□□ 0.26
UBC-208ENST00000540700 CA5BQ9Y2D0 317 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 SNX24Q9Y343 169 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 ZNF711Q9Y462 761 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 URB1O60287 2271 aaKnown RBP16.69■□□□□ 0.26
UBC-208ENST00000540700 PCDH15Q96QU1 1955 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 FAM187AA6NFU0 413 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 ERI2A8K979 691 aaKnown RBP16.68■□□□□ 0.26
UBC-208ENST00000540700 E7EVH7 732 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 NEMP1O14524 444 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 KALRNO60229 2985 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 CYP2A6P11509 494 aaPredicted RBP16.68■□□□□ 0.26
UBC-208ENST00000540700 ADCY8P40145 1251 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 CCR5P51681 352 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 STC1P52823 247 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 CCDC15Q0P6D6 951 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 PTPRCAPQ14761 206 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 CERCAMQ5T4B2 595 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 IZUMO3Q5VZ72 239 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 DUPD1Q68J44 220 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 KIAA1161Q6NSJ0 714 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 NEK5Q6P3R8 708 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 CEP112Q8N8E3 955 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 BLOC1S5Q8TDH9 187 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 SETD7Q8WTS6 366 aaKnown RBP16.68■□□□□ 0.26
UBC-208ENST00000540700 COQ10AQ96MF6 247 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 PWWP2AQ96N64 755 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 MAGEE1Q9HCI5 957 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 KCTD3Q9Y597 815 aa16.68■□□□□ 0.26
UBC-208ENST00000540700 LRRK1Q38SD2 2015 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 C1orf232A0A0U1RR37 186 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 GOLGA6CA6NDK9 693 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 GOLGA6BA6NDN3 693 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 GOLGA8MH3BSY2 632 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 PSMD3O43242 534 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 BUD23O43709 281 aaKnown RBP16.67■□□□□ 0.26
UBC-208ENST00000540700 AVILO75366 819 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 SEC31AO94979 1220 aaKnown RBP16.67■□□□□ 0.26
UBC-208ENST00000540700 PAK4O96013 591 aaPredicted RBP16.67■□□□□ 0.26
UBC-208ENST00000540700 SLC4A1P02730 911 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 ELFN1P0C7U0 828 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 GOLGA6DP0CG33 693 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 GNSP15586 552 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 ETV3P41162 512 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 LMAN1P49257 510 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 RPS21P63220 83 aaKnown RBP16.67■□□□□ 0.26
UBC-208ENST00000540700 GRIK2Q13002 908 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 DENND2CQ68D51 928 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 NAPEPLDQ6IQ20 393 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 TMC3Q7Z5M5 1100 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 TECPR1Q7Z6L1 1165 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 MARCH9Q86YJ5 346 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 TP53I13Q8NBR0 393 aaPredicted RBP16.67■□□□□ 0.26
UBC-208ENST00000540700 MNS1Q8NEH6 495 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 C1orf216Q8TAB5 229 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 KLF6Q99612 283 aaPredicted RBP16.67■□□□□ 0.26
UBC-208ENST00000540700 MYOCQ99972 504 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 ERP44Q9BS26 406 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 C1QTNF2Q9BXJ5 285 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 DPH5Q9H2P9 285 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 GOLGA6AQ9NYA3 693 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 GRHL1Q9NZI5 618 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 DMGDHQ9UI17 866 aaKnown RBP16.67■□□□□ 0.26
UBC-208ENST00000540700 TPX2Q9ULW0 747 aaKnown RBP16.67■□□□□ 0.26
UBC-208ENST00000540700 ARL5AQ9Y689 179 aa16.67■□□□□ 0.26
UBC-208ENST00000540700 A0A1W2PPC4 97 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 EFCAB8A8MWE9 144 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 SLC31A1O15431 190 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 RECQL5O94762 991 aaPredicted RBP16.66■□□□□ 0.26
UBC-208ENST00000540700 ITGA8P53708 1063 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 CRADDP78560 199 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 HIBCHQ6NVY1 386 aaPredicted RBP16.66■□□□□ 0.26
UBC-208ENST00000540700 C8orf74Q6P047 294 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 LRRC8BQ6P9F7 803 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 PPP1R21Q6ZMI0 780 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 Q6ZVL8 140 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 MAATS1Q7Z4T9 603 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 PPIL6Q8IXY8 311 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 MPP5Q8N3R9 675 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 CCHCR1Q8TD31 782 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 DNASE2BQ8WZ79 361 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 SNX19Q92543 992 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 FUBP1Q96AE4 644 aaKnown RBP16.66■□□□□ 0.26
UBC-208ENST00000540700 LRRC45Q96CN5 670 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms